Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21050

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,599,966	+		AO353_21045	0.58	+2.0
4,599,966	+		AO353_21045	0.58	+2.0
4,599,967	-		AO353_21045	0.59	-0.3
4,599,967	-		AO353_21045	0.59	-1.0
4,599,967	-		AO353_21045	0.59	-0.3
4,599,967	-		AO353_21045	0.59	-0.5
4,599,967	-		AO353_21045	0.59	+1.4
4,599,967	-		AO353_21045	0.59	+1.0
4,600,024	+		AO353_21045	0.61	+3.1
4,600,024	+		AO353_21045	0.61	+1.9
4,600,025	-		AO353_21045	0.61	-2.3
4,600,152	-		AO353_21045	0.68	-1.1
4,600,173	+		AO353_21045	0.69	+3.4
4,600,174	-		AO353_21045	0.69	+0.6
4,600,174	-		AO353_21045	0.69	+0.2
4,600,174	-		AO353_21045	0.69	+1.1
4,600,200	-		AO353_21045	0.70	-1.5
4,600,200	-		AO353_21045	0.70	-2.1
4,600,200	-		AO353_21045	0.70	-0.2
4,600,200	-		AO353_21045	0.70	+0.4
4,600,200	-		AO353_21045	0.70	-0.1
4,600,200	-		AO353_21045	0.70	-1.6
4,600,200	-		AO353_21045	0.70	-1.5
4,600,299	+		AO353_21045	0.75	+2.7
4,600,299	+		AO353_21045	0.75	+1.8
4,600,300	-		AO353_21045	0.75	-1.0
4,600,300	-		AO353_21045	0.75	-0.3
4,600,300	-		AO353_21045	0.75	-1.3
4,600,300	-		AO353_21045	0.75	+0.3
4,600,300	-		AO353_21045	0.75	-0.1
4,600,300	-		AO353_21045	0.75	-1.0
4,600,302	+		AO353_21045	0.75	+3.1
4,600,302	+		AO353_21045	0.75	+2.2
4,600,303	-		AO353_21045	0.75	+1.9
4,600,303	-		AO353_21045	0.75	-0.4
4,600,303	-		AO353_21045	0.75	+1.0
4,600,303	-		AO353_21045	0.75	-0.4
4,600,345	-		AO353_21045	0.77	+0.4
4,600,345	-		AO353_21045	0.77	+1.0
4,600,345	-		AO353_21045	0.77	-0.4
4,600,345	-		AO353_21045	0.77	+0.1
4,600,363	-		AO353_21045	0.78	+0.8
4,600,534	-		AO353_21045	0.87	-1.1
4,600,534	-		AO353_21045	0.87	-0.3
4,600,534	-		AO353_21045	0.87	-0.7
4,600,534	-		AO353_21045	0.87	-1.2
4,600,560	+		AO353_21045	0.88	+2.6
4,600,561	-		AO353_21045	0.88	-0.4
4,600,561	-		AO353_21045	0.88	+0.7
4,600,561	-		AO353_21045	0.88	+1.2
4,600,561	-		AO353_21045	0.88	-0.5
4,600,561	-		AO353_21045	0.88	+0.4
4,600,561	-		AO353_21045	0.88	-0.3
4,600,569	+		AO353_21045	0.88	+2.2
4,600,569	+		AO353_21045	0.88	+1.6
4,600,570	-		AO353_21045	0.88	-0.3
4,600,570	-		AO353_21045	0.88	-0.1
4,600,587	+		AO353_21045	0.89	+2.0
4,600,587	+		AO353_21045	0.89	+1.2
4,600,588	-		AO353_21045	0.89	+0.1
4,600,588	-		AO353_21045	0.89	+0.5
4,600,588	-		AO353_21045	0.89	-0.2
4,600,633	+				+2.4
4,600,633	+				+1.5
4,600,633	+				+3.6
4,600,634	-				-2.1
4,600,634	-				-0.4
4,600,634	-				+1.7
4,600,634	-				-0.8
4,600,634	-				+1.1
4,600,634	-				+0.0
4,600,705	-				+1.4
4,600,705	-				+0.5
4,600,705	-				-0.9
4,600,705	-				-1.1
4,600,816	+				+2.3
4,600,836	+				+2.1
4,600,837	-				-0.8
4,600,857	+				-0.0
4,600,857	+				+0.6
4,600,857	+				+0.6
4,600,857	+				+0.6
4,600,857	+				-0.0
4,600,857	+				+0.5
4,600,858	-				+0.7
4,600,858	-				+1.7
4,600,858	-				-1.6
4,600,858	-				-2.8
4,600,858	-				+0.7
4,601,003	-		AO353_21050	0.12	-2.6
4,601,119	+		AO353_21050	0.20	+0.9
4,601,119	+		AO353_21050	0.20	+1.5
4,601,120	-		AO353_21050	0.20	+0.1
4,601,120	-		AO353_21050	0.20	+0.4
4,601,120	-		AO353_21050	0.20	+1.0
4,601,120	-		AO353_21050	0.20	+0.7
4,601,120	-		AO353_21050	0.20	+0.2
4,601,389	+		AO353_21050	0.40	+1.4
4,601,389	+		AO353_21050	0.40	+1.7
4,601,390	-		AO353_21050	0.40	-0.6
4,601,451	+		AO353_21050	0.45	+0.9
4,601,452	-		AO353_21050	0.45	+0.0
4,601,452	-		AO353_21050	0.45	+0.3
4,601,452	-		AO353_21050	0.45	-0.4
4,601,506	+		AO353_21050	0.49	+2.7
4,601,506	+		AO353_21050	0.49	+2.1
4,601,506	+		AO353_21050	0.49	+0.5
4,601,506	+		AO353_21050	0.49	+2.5
4,601,506	+		AO353_21050	0.49	+1.0
4,601,506	+		AO353_21050	0.49	+2.8
4,601,507	-		AO353_21050	0.49	+0.0
4,601,507	-		AO353_21050	0.49	+0.0
4,601,507	-		AO353_21050	0.49	-1.0
4,601,507	-		AO353_21050	0.49	+0.3
4,601,507	-		AO353_21050	0.49	+0.3
4,601,507	-		AO353_21050	0.49	-0.5
4,601,509	+		AO353_21050	0.49	+2.4
4,601,509	+		AO353_21050	0.49	+2.4
4,601,528	-		AO353_21050	0.50	-1.6
4,601,615	-		AO353_21050	0.57	-1.0
4,601,615	-		AO353_21050	0.57	+1.0
4,601,659	+		AO353_21050	0.60	+0.9
4,601,659	+		AO353_21050	0.60	+1.5
4,601,659	+		AO353_21050	0.60	+2.0
4,601,659	+		AO353_21050	0.60	+2.0
4,601,660	-		AO353_21050	0.60	-0.4
4,601,660	-		AO353_21050	0.60	-0.6
4,601,698	+		AO353_21050	0.63	+2.8
4,601,779	+		AO353_21050	0.69	+2.3
4,601,779	+		AO353_21050	0.69	+0.3
4,601,788	+		AO353_21050	0.70	+3.2
4,601,788	+		AO353_21050	0.70	+2.7
4,601,788	+		AO353_21050	0.70	+2.7
4,601,789	-		AO353_21050	0.70	+0.6
4,601,789	-		AO353_21050	0.70	+0.4
4,601,789	-		AO353_21050	0.70	+0.2
4,601,789	-		AO353_21050	0.70	+0.6
4,601,800	+		AO353_21050	0.70	+2.9
4,601,819	+		AO353_21050	0.72	+3.3
4,601,820	-		AO353_21050	0.72	+1.5
4,601,851	+		AO353_21050	0.74	+2.9
4,601,852	-		AO353_21050	0.74	-0.6
4,601,852	-		AO353_21050	0.74	+0.4
4,601,920	+		AO353_21050	0.79	+2.0
4,601,920	+		AO353_21050	0.79	+3.3
4,601,921	-		AO353_21050	0.79	-0.4
4,601,921	-		AO353_21050	0.79	+0.6
4,601,939	-		AO353_21050	0.81	+0.3
4,601,939	-				+0.7
4,601,939	-		AO353_21050	0.81	+0.0
4,601,939	-		AO353_21050	0.81	-2.3
4,601,980	+		AO353_21050	0.84	+2.0
4,602,002	-				-0.6
4,602,034	+		AO353_21050	0.88	+1.7
4,602,034	+		AO353_21050	0.88	+2.8
4,602,034	+		AO353_21050	0.88	+2.1
4,602,035	-		AO353_21050	0.88	-0.4
4,602,035	-		AO353_21050	0.88	+1.5
4,602,074	-				-1.9
4,602,074	-				+0.7
4,602,074	-				+0.6
4,602,095	-				+1.4
4,602,095	-				-2.3
4,602,095	-				-0.3
4,602,095	-				+1.1
4,602,121	+				+0.7
4,602,136	+				+1.6
4,602,137	-				+0.7
4,602,137	-				+0.1
4,602,137	-				-2.3
4,602,137	-				+0.4
4,602,137	-				+1.3
4,602,137	-				+0.9
4,602,272	+				+2.9
4,602,273	-				-1.6
4,602,273	-				+0.3
4,602,355	-				-1.9
4,602,474	+		AO353_21055	0.19	+2.5
4,602,474	+		AO353_21055	0.19	+1.3
4,602,474	+		AO353_21055	0.19	+3.4
4,602,475	-		AO353_21055	0.19	-1.5
4,602,804	+		AO353_21055	0.49	+2.1
4,602,805	-		AO353_21055	0.50	+1.1
4,602,805	-		AO353_21055	0.50	+0.1
4,602,878	+		AO353_21055	0.56	+1.7
4,602,936	+		AO353_21055	0.62	+1.5
4,602,936	+		AO353_21055	0.62	-0.4
4,602,937	-		AO353_21055	0.62	+0.0
4,602,937	-		AO353_21055	0.62	-0.4
4,602,937	-		AO353_21055	0.62	+1.0
4,603,012	-		AO353_21055	0.69	+0.2
4,603,177	-		AO353_21055	0.84	+0.3