Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20085

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,417,745	+		AO353_20080	0.62	-0.3
4,417,745	+		AO353_20080	0.62	+1.6
4,417,745	+		AO353_20080	0.62	+0.0
4,417,746	-		AO353_20080	0.62	+0.8
4,417,746	-		AO353_20080	0.62	-0.2
4,417,746	-		AO353_20080	0.62	+1.3
4,417,746	-		AO353_20080	0.62	+0.5
4,417,758	-		AO353_20080	0.63	+2.2
4,417,764	+		AO353_20080	0.63	+0.4
4,417,764	+		AO353_20080	0.63	-1.1
4,417,764	+		AO353_20080	0.63	+2.5
4,417,764	+		AO353_20080	0.63	-0.8
4,417,764	+				+0.2
4,417,764	+		AO353_20080	0.63	-1.3
4,417,764	+		AO353_20080	0.63	-1.7
4,417,765	-		AO353_20080	0.63	-0.9
4,417,787	+		AO353_20080	0.64	+0.8
4,417,787	+		AO353_20080	0.64	-0.6
4,417,787	+		AO353_20080	0.64	-0.3
4,417,787	+		AO353_20080	0.64	-0.3
4,417,787	+		AO353_20080	0.64	+0.0
4,417,787	+		AO353_20080	0.64	-1.1
4,417,788	-		AO353_20080	0.64	-0.6
4,417,788	-		AO353_20080	0.64	+0.6
4,417,820	+		AO353_20080	0.65	+0.0
4,417,820	+		AO353_20080	0.65	-0.1
4,417,820	+		AO353_20080	0.65	-0.4
4,417,821	-		AO353_20080	0.66	-1.3
4,417,839	+		AO353_20080	0.66	-1.8
4,417,840	-		AO353_20080	0.66	+0.2
4,418,030	+		AO353_20080	0.75	-0.5
4,418,030	+		AO353_20080	0.75	-0.4
4,418,030	+		AO353_20080	0.75	+0.4
4,418,030	+		AO353_20080	0.75	+0.5
4,418,030	+		AO353_20080	0.75	-0.7
4,418,030	+		AO353_20080	0.75	-1.1
4,418,030	+		AO353_20080	0.75	+0.4
4,418,030	+		AO353_20080	0.75	-0.8
4,418,030	+		AO353_20080	0.75	+1.2
4,418,031	-		AO353_20080	0.75	-1.9
4,418,031	-		AO353_20080	0.75	-2.7
4,418,031	-		AO353_20080	0.75	+1.8
4,418,031	-		AO353_20080	0.75	-0.2
4,418,031	-		AO353_20080	0.75	-0.1
4,418,031	-		AO353_20080	0.75	+0.5
4,418,031	-		AO353_20080	0.75	-1.2
4,418,056	+		AO353_20080	0.76	+1.2
4,418,056	+		AO353_20080	0.76	-2.0
4,418,057	-		AO353_20080	0.76	-0.9
4,418,185	+		AO353_20080	0.82	+0.1
4,418,186	-		AO353_20080	0.82	+0.2
4,418,289	+		AO353_20080	0.87	+0.8
4,418,289	+		AO353_20080	0.87	+0.1
4,418,289	+		AO353_20080	0.87	-0.7
4,418,289	+		AO353_20080	0.87	+1.6
4,418,290	-		AO353_20080	0.87	-0.2
4,418,290	-		AO353_20080	0.87	-1.0
4,418,290	-		AO353_20080	0.87	+1.0
4,418,291	+		AO353_20080	0.87	-0.3
4,418,291	+		AO353_20080	0.87	-1.6
4,418,291	+		AO353_20080	0.87	+0.3
4,418,291	+		AO353_20080	0.87	-0.1
4,418,291	+		AO353_20080	0.87	-1.2
4,418,291	+		AO353_20080	0.87	-0.4
4,418,291	+		AO353_20080	0.87	-0.5
4,418,292	-		AO353_20080	0.87	+0.2
4,418,292	-		AO353_20080	0.87	-1.3
4,418,292	-		AO353_20080	0.87	-0.9
4,418,292	-		AO353_20080	0.87	+1.1
4,418,292	-		AO353_20080	0.87	-1.2
4,418,292	-		AO353_20080	0.87	+0.5
4,418,292	-		AO353_20080	0.87	+0.1
4,418,360	+		AO353_20080	0.90	+1.6
4,418,360	+		AO353_20080	0.90	-0.2
4,418,360	+		AO353_20080	0.90	-0.4
4,418,360	+		AO353_20080	0.90	+1.8
4,418,360	+		AO353_20080	0.90	-2.1
4,418,360	+		AO353_20080	0.90	+0.9
4,418,361	-		AO353_20080	0.90	-0.3
4,418,361	-		AO353_20080	0.90	-0.8
4,418,361	-		AO353_20080	0.90	+0.0
4,418,361	-		AO353_20080	0.90	-2.8
4,418,361	-		AO353_20080	0.90	+1.2
4,418,581	+				+0.6
4,418,581	+				+0.5
4,418,582	-				-0.6
4,418,582	-				-0.3
4,418,582	-				+0.3
4,418,582	-				-0.9
4,418,582	-				+0.0
4,418,622	+				+0.2
4,418,622	+				+0.5
4,418,623	-				-0.1
4,418,623	-				-1.4
4,418,623	-				+0.7
4,418,623	-				+1.4
4,418,626	+				+1.4
4,418,627	-				+0.2
4,418,627	-				-0.4
4,418,627	-				-1.0
4,418,640	+				+0.8
4,418,640	+				+0.1
4,418,640	+				+0.3
4,418,640	+				-0.1
4,418,640	+				+1.0
4,418,640	+				-0.3
4,418,641	-				+0.0
4,418,641	-				-0.9
4,418,886	+		AO353_20085	0.58	-1.0
4,418,886	+		AO353_20085	0.58	+0.8
4,418,886	+		AO353_20085	0.58	+0.5
4,418,887	-		AO353_20085	0.58	-0.3
4,418,887	-		AO353_20085	0.58	-0.8
4,418,889	+		AO353_20085	0.59	-0.3
4,418,889	+		AO353_20085	0.59	+0.4
4,418,889	+		AO353_20085	0.59	+0.1
4,418,890	-		AO353_20085	0.59	+1.6
4,418,890	-		AO353_20085	0.59	-0.8
4,418,890	-		AO353_20085	0.59	-0.9
4,418,890	-		AO353_20085	0.59	-1.0
4,418,916	-		AO353_20085	0.65	-0.7
4,418,929	-		AO353_20085	0.67	-0.4
4,418,929	-		AO353_20085	0.67	-1.0
4,418,932	+		AO353_20085	0.68	-0.8
4,418,933	-		AO353_20085	0.68	+0.6
4,418,933	-		AO353_20085	0.68	+1.2
4,418,933	-		AO353_20085	0.68	-0.9
4,418,952	+		AO353_20085	0.72	-1.5
4,418,952	+		AO353_20085	0.72	-0.5
4,418,952	+		AO353_20085	0.72	-0.2
4,418,953	-		AO353_20085	0.72	-1.6
4,418,953	-		AO353_20085	0.72	+1.4
4,418,953	-		AO353_20085	0.72	-2.5
4,418,953	-		AO353_20085	0.72	+0.0
4,418,964	+		AO353_20085	0.75	+0.1
4,418,964	+		AO353_20085	0.75	-0.9
4,418,964	+		AO353_20085	0.75	+1.3
4,418,965	-		AO353_20085	0.75	-0.4
4,418,965	-		AO353_20085	0.75	+0.2
4,419,126	+				+0.0
4,419,126	+				-0.1
4,419,126	+				+0.4
4,419,126	+				+1.0
4,419,126	+				+0.9
4,419,188	+				-1.4
4,419,188	+				-0.5
4,419,188	+				+1.2
4,419,188	+				-0.9
4,419,188	+				-0.2
4,419,189	-				-2.4
4,419,226	+				-1.2
4,419,227	-				-0.3
4,419,262	+				-1.0
4,419,262	+				+1.1
4,419,262	+				-0.2
4,419,262	+				-0.7
4,419,262	+				+0.7
4,419,263	-				-0.3
4,419,263	-				-0.8
4,419,348	+		AO353_20090	0.20	-0.6
4,419,443	+		AO353_20090	0.34	-1.9
4,419,443	+		AO353_20090	0.34	+0.2
4,419,443	+		AO353_20090	0.34	+0.5
4,419,443	+		AO353_20090	0.34	-1.9
4,419,443	+		AO353_20090	0.34	+0.9
4,419,443	+		AO353_20090	0.34	-1.3
4,419,444	-		AO353_20090	0.35	+0.3
4,419,466	+		AO353_20090	0.38	-0.6
4,419,507	+		AO353_20090	0.44	+2.8
4,419,508	-		AO353_20090	0.44	-0.4
4,419,508	-		AO353_20090	0.44	-0.5
4,419,571	-		AO353_20090	0.54	+1.5
4,419,579	-		AO353_20090	0.55	+0.8
4,419,750	+		AO353_20090	0.81	+0.4
4,419,750	+		AO353_20090	0.81	+0.0
4,419,750	+		AO353_20090	0.81	-0.3
4,419,750	+		AO353_20090	0.81	+1.4
4,419,751	-		AO353_20090	0.81	-1.7
4,419,751	-		AO353_20090	0.81	-0.8
4,419,751	-		AO353_20090	0.81	-1.7
4,419,751	-		AO353_20090	0.81	+1.0
4,419,751	-		AO353_20090	0.81	-0.8
4,419,751	-		AO353_20090	0.81	+0.2
4,419,792	+		AO353_20090	0.87	-0.1
4,419,792	+		AO353_20090	0.87	-1.5
4,419,792	+		AO353_20090	0.87	-0.5
4,419,792	+				-0.5
4,419,792	+		AO353_20090	0.87	+0.7
4,419,792	+		AO353_20090	0.87	-0.0
4,419,792	+		AO353_20090	0.87	+0.3
4,419,792	+		AO353_20090	0.87	-0.3
4,419,792	+		AO353_20090	0.87	+0.0
4,419,792	+		AO353_20090	0.87	-0.5
4,419,792	+		AO353_20090	0.87	+0.1
4,419,792	+		AO353_20090	0.87	-0.4
4,419,792	+		AO353_20090	0.87	+1.1
4,419,792	+		AO353_20090	0.87	-0.2
4,419,793	-		AO353_20090	0.87	-0.4
4,419,793	-		AO353_20090	0.87	-0.5
4,419,793	-		AO353_20090	0.87	-0.5
4,419,793	-		AO353_20090	0.87	+0.0
4,419,793	-		AO353_20090	0.87	-0.8
4,419,793	-		AO353_20090	0.87	+0.0
4,419,793	-		AO353_20090	0.87	-0.7
4,419,793	-		AO353_20090	0.87	+2.5
4,419,793	-		AO353_20090	0.87	+0.1
4,419,793	-		AO353_20090	0.87	+0.8
4,419,793	-		AO353_20090	0.87	-1.8
4,419,793	-		AO353_20090	0.87	-0.2
4,419,793	-		AO353_20090	0.87	-2.2
4,419,793	-		AO353_20090	0.87	-0.8
4,419,793	-		AO353_20090	0.87	+0.3
4,419,793	-		AO353_20090	0.87	-0.6
4,419,793	-		AO353_20090	0.87	+1.3