Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19865

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,364,543	-				+0.7
4,364,543	-				-2.0
4,364,543	-				-1.5
4,364,576	+				+0.0
4,364,577	-				-0.3
4,364,577	-				+1.8
4,364,631	+				-1.3
4,364,631	+				+2.5
4,364,642	-				-0.2
4,364,805	+		AO353_19860	0.20	+0.4
4,364,805	+				-0.5
4,364,806	-		AO353_19860	0.20	+1.8
4,364,806	-		AO353_19860	0.20	-0.5
4,364,913	-		AO353_19860	0.32	-0.3
4,364,950	+		AO353_19860	0.36	-2.3
4,364,951	-		AO353_19860	0.36	+0.5
4,365,198	+		AO353_19860	0.63	+1.0
4,365,198	+		AO353_19860	0.63	+0.9
4,365,198	+		AO353_19860	0.63	+1.0
4,365,199	-		AO353_19860	0.63	+0.1
4,365,204	+		AO353_19860	0.63	-0.5
4,365,204	+		AO353_19860	0.63	-0.9
4,365,204	+		AO353_19860	0.63	-0.0
4,365,205	-		AO353_19860	0.63	-0.2
4,365,267	+		AO353_19860	0.70	+0.3
4,365,267	+		AO353_19860	0.70	-1.3
4,365,268	-		AO353_19860	0.70	+2.8
4,365,268	-		AO353_19860	0.70	-2.0
4,365,268	-		AO353_19860	0.70	-1.5
4,365,268	-		AO353_19860	0.70	-1.4
4,365,268	-		AO353_19860	0.70	+2.1
4,365,268	-		AO353_19860	0.70	-0.6
4,365,268	-		AO353_19860	0.70	-0.5
4,365,268	-		AO353_19860	0.70	-2.1
4,365,268	-		AO353_19860	0.70	+0.8
4,365,268	-		AO353_19860	0.70	-3.0
4,365,268	-		AO353_19860	0.70	+0.4
4,365,329	+		AO353_19860	0.77	+0.5
4,365,330	-		AO353_19860	0.77	-1.6
4,365,330	-		AO353_19860	0.77	-2.1
4,365,330	-		AO353_19860	0.77	-0.2
4,365,332	-		AO353_19860	0.77	-0.6
4,365,332	-		AO353_19860	0.77	+0.8
4,365,399	+		AO353_19860	0.84	+0.8
4,365,399	+		AO353_19860	0.84	-1.4
4,365,483	+				+0.2
4,365,639	+		AO353_19865	0.11	-0.9
4,365,700	+		AO353_19865	0.17	+0.6
4,365,700	+		AO353_19865	0.17	+1.2
4,365,700	+		AO353_19865	0.17	-0.3
4,365,701	-		AO353_19865	0.17	-1.4
4,365,701	-		AO353_19865	0.17	+0.6
4,365,769	+		AO353_19865	0.24	+0.8
4,365,770	-		AO353_19865	0.24	+1.2
4,365,770	-		AO353_19865	0.24	-0.9
4,365,912	-		AO353_19865	0.39	-0.1
4,365,912	-		AO353_19865	0.39	+0.4
4,365,950	+		AO353_19865	0.42	-0.5
4,365,950	+		AO353_19865	0.42	-0.3
4,365,950	+		AO353_19865	0.42	-0.9
4,365,950	+		AO353_19865	0.42	+0.0
4,365,950	+		AO353_19865	0.42	-0.0
4,365,950	+		AO353_19865	0.42	+0.7
4,365,951	-		AO353_19865	0.43	-1.0
4,365,951	-		AO353_19865	0.43	-1.4
4,365,951	-		AO353_19865	0.43	-1.1
4,365,952	+		AO353_19865	0.43	+0.5
4,365,952	+		AO353_19865	0.43	-0.0
4,365,952	+		AO353_19865	0.43	+1.1
4,365,952	+		AO353_19865	0.43	+1.8
4,365,952	+		AO353_19865	0.43	+0.3
4,365,952	+		AO353_19865	0.43	+0.4
4,365,952	+		AO353_19865	0.43	+1.1
4,365,952	+		AO353_19865	0.43	-1.4
4,365,953	-		AO353_19865	0.43	-0.3
4,365,953	-		AO353_19865	0.43	-0.7
4,365,953	-		AO353_19865	0.43	-1.5
4,365,953	-		AO353_19865	0.43	-0.3
4,365,953	-		AO353_19865	0.43	+0.7
4,365,953	-		AO353_19865	0.43	-1.4
4,366,014	-		AO353_19865	0.49	+0.5
4,366,078	+		AO353_19865	0.55	-0.2
4,366,079	-		AO353_19865	0.56	-0.2
4,366,079	-		AO353_19865	0.56	+1.5
4,366,079	-		AO353_19865	0.56	-1.1
4,366,151	+		AO353_19865	0.63	+0.9
4,366,151	+		AO353_19865	0.63	-1.0
4,366,151	+		AO353_19865	0.63	+2.9
4,366,152	-		AO353_19865	0.63	-0.5
4,366,176	+		AO353_19865	0.65	-0.3
4,366,177	-		AO353_19865	0.66	+3.1
4,366,177	-		AO353_19865	0.66	+0.9
4,366,429	+				+0.3
4,366,430	-				-2.3
4,366,498	+				+0.1
4,366,498	+				-0.3
4,366,498	+				-0.9
4,366,499	-				-1.5
4,366,499	-				-0.8
4,366,499	-				-1.4
4,366,620	+				-1.3
4,366,620	+				+1.4
4,366,700	+		AO353_19870	0.20	+1.3
4,366,700	+		AO353_19870	0.20	-2.2
4,366,701	-		AO353_19870	0.20	+0.7
4,366,701	-		AO353_19870	0.20	+1.3
4,366,732	+		AO353_19870	0.24	+0.2
4,366,733	-		AO353_19870	0.24	-0.3
4,366,733	-		AO353_19870	0.24	+0.3
4,366,764	+		AO353_19870	0.29	+0.6
4,366,867	+		AO353_19870	0.42	+0.7
4,366,896	+		AO353_19870	0.46	-0.1
4,366,896	+		AO353_19870	0.46	-0.9
4,366,896	+		AO353_19870	0.46	+1.7
4,366,897	-		AO353_19870	0.46	+0.8
4,366,897	-		AO353_19870	0.46	-1.2
4,366,974	+		AO353_19870	0.56	-0.1
4,366,974	+		AO353_19870	0.56	-1.0
4,366,974	+		AO353_19870	0.56	-0.5
4,366,975	-		AO353_19870	0.57	+2.8
4,366,975	-		AO353_19870	0.57	+1.4
4,367,027	-		AO353_19870	0.63	-0.1
4,367,132	+		AO353_19870	0.77	-0.7
4,367,132	+		AO353_19870	0.77	+0.4
4,367,152	-		AO353_19870	0.80	-0.2
4,367,158	+		AO353_19870	0.81	-0.0
4,367,159	-		AO353_19870	0.81	+2.5
4,367,191	+		AO353_19870	0.85	-0.6
4,367,191	+		AO353_19870	0.85	-2.9
4,367,191	+		AO353_19870	0.85	-0.6
4,367,192	-		AO353_19870	0.85	-0.4
4,367,264	+				-0.7
4,367,291	+				+0.2
4,367,292	-				-0.7
4,367,292	-				-0.3
4,367,322	+				-0.3
4,367,322	+				-1.5
4,367,322	+				-0.6
4,367,322	+				-1.1
4,367,323	-				+0.2
4,367,323	-				-2.4
4,367,323	-				-2.1
4,367,331	+				-2.5
4,367,331	+				+0.1
4,367,332	-				-0.5
4,367,358	+				+0.3
4,367,358	+				-2.1
4,367,359	-				-0.7
4,367,365	+				+0.1
4,367,382	+				+0.6
4,367,382	+				+0.2
4,367,382	+				+0.0
4,367,383	-				-1.8
4,367,383	-				-0.5
4,367,478	+				+1.4
4,367,478	+				-0.1
4,367,479	-				+0.7
4,367,479	-				+0.9
4,367,479	-				+0.3