Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13005

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,879,013	+				-0.1
2,879,013	+				+0.9
2,879,013	+				-0.2
2,879,013	+				+0.5
2,879,014	-				-0.8
2,879,014	-				+1.0
2,879,014	-				-1.0
2,879,014	-				-0.1
2,879,014	-				+0.1
2,879,014	-				-1.2
2,879,014	-				-1.6
2,879,014	-				-1.2
2,879,040	-				+1.1
2,879,040	-				+1.1
2,879,095	-				-0.2
2,879,107	+				+1.5
2,879,108	-				+1.6
2,879,114	+				+1.5
2,879,114	+				+1.6
2,879,114	+				-0.2
2,879,114	+				+0.9
2,879,114	+				+3.2
2,879,114	+				+2.0
2,879,114	+				+2.3
2,879,114	+				+1.5
2,879,115	-				+2.3
2,879,115	-				+0.8
2,879,115	-				+0.3
2,879,172	+				+2.3
2,879,172	+				+3.1
2,879,172	+				+3.9
2,879,172	+				+1.5
2,879,172	+				+3.3
2,879,173	-				+2.2
2,879,173	-				+2.7
2,879,188	-				+2.6
2,879,262	+		AO353_13005	0.12	+2.7
2,879,262	+		AO353_13005	0.12	+3.0
2,879,262	+		AO353_13005	0.12	+1.6
2,879,262	+		AO353_13005	0.12	+2.7
2,879,262	+		AO353_13005	0.12	+2.3
2,879,263	-		AO353_13005	0.12	+2.0
2,879,263	-		AO353_13005	0.12	+4.3
2,879,263	-		AO353_13005	0.12	+2.8
2,879,283	+		AO353_13005	0.13	+2.4
2,879,283	+		AO353_13005	0.13	+2.7
2,879,283	+		AO353_13005	0.13	+3.3
2,879,283	+		AO353_13005	0.13	+2.8
2,879,283	+		AO353_13005	0.13	+2.8
2,879,283	+		AO353_13005	0.13	+2.2
2,879,283	+		AO353_13005	0.13	+2.2
2,879,283	+		AO353_13005	0.13	+2.9
2,879,283	+		AO353_13005	0.13	+3.2
2,879,284	-		AO353_13005	0.13	+2.8
2,879,284	-		AO353_13005	0.13	+3.3
2,879,284	-		AO353_13005	0.13	+2.6
2,879,284	-		AO353_13005	0.13	+3.0
2,879,284	-		AO353_13005	0.13	+1.3
2,879,284	-		AO353_13005	0.13	+2.9
2,879,301	+		AO353_13005	0.14	+3.0
2,879,301	+		AO353_13005	0.14	+4.2
2,879,301	+		AO353_13005	0.14	+3.4
2,879,301	+		AO353_13005	0.14	+3.3
2,879,301	+		AO353_13005	0.14	+3.3
2,879,301	+		AO353_13005	0.14	+2.6
2,879,301	+		AO353_13005	0.14	+2.5
2,879,301	+		AO353_13005	0.14	+3.1
2,879,301	+		AO353_13005	0.14	+3.0
2,879,301	+		AO353_13005	0.14	+2.5
2,879,301	+		AO353_13005	0.14	+2.9
2,879,301	+		AO353_13005	0.14	+2.4
2,879,302	-		AO353_13005	0.15	+2.5
2,879,302	-		AO353_13005	0.15	+2.0
2,879,302	-		AO353_13005	0.15	+2.4
2,879,302	-		AO353_13005	0.15	+2.7
2,879,302	-		AO353_13005	0.15	+2.8
2,879,302	-		AO353_13005	0.15	+3.5
2,879,302	-		AO353_13005	0.15	+2.0
2,879,302	-		AO353_13005	0.15	+1.0
2,879,324	+		AO353_13005	0.16	+3.7
2,879,324	+		AO353_13005	0.16	+1.5
2,879,325	-		AO353_13005	0.16	+2.9
2,879,325	-		AO353_13005	0.16	+3.0
2,879,348	+		AO353_13005	0.18	+2.3
2,879,349	-		AO353_13005	0.18	+2.1
2,879,523	+		AO353_13005	0.30	+2.8
2,879,562	+		AO353_13005	0.33	+3.7
2,879,562	+		AO353_13005	0.33	+2.3
2,879,562	+		AO353_13005	0.33	+2.0
2,879,562	+		AO353_13005	0.33	+2.5
2,879,562	+		AO353_13005	0.33	+2.1
2,879,562	+		AO353_13005	0.33	+3.0
2,879,563	-		AO353_13005	0.33	+1.8
2,879,563	-		AO353_13005	0.33	+0.3
2,879,563	-		AO353_13005	0.33	+0.3
2,879,563	-		AO353_13005	0.33	+4.3
2,879,617	-		AO353_13005	0.36	+2.2
2,879,676	+		AO353_13005	0.40	+2.3
2,879,676	+		AO353_13005	0.40	+0.3
2,879,676	+		AO353_13005	0.40	+2.1
2,879,676	+		AO353_13005	0.40	+2.4
2,879,677	-		AO353_13005	0.41	+2.5
2,879,677	-		AO353_13005	0.41	+2.6
2,879,677	-		AO353_13005	0.41	+2.5
2,879,754	+		AO353_13005	0.46	+2.1
2,879,754	+		AO353_13005	0.46	+2.8
2,879,754	+		AO353_13005	0.46	+1.1
2,879,754	+		AO353_13005	0.46	+1.9
2,879,754	+		AO353_13005	0.46	+2.5
2,879,755	-		AO353_13005	0.46	+1.9
2,879,755	-		AO353_13005	0.46	+3.0
2,879,755	-		AO353_13005	0.46	+2.9
2,879,755	-		AO353_13005	0.46	+3.1
2,879,755	-		AO353_13005	0.46	+0.8
2,879,871	+		AO353_13005	0.54	+1.2
2,879,871	+		AO353_13005	0.54	+2.0
2,879,871	+		AO353_13005	0.54	+3.4
2,879,871	+		AO353_13005	0.54	+2.7
2,879,872	-		AO353_13005	0.54	+3.1
2,879,872	-		AO353_13005	0.54	+2.9
2,879,872	-		AO353_13005	0.54	+3.2
2,879,872	-		AO353_13005	0.54	+2.1
2,879,872	-		AO353_13005	0.54	+2.4
2,879,872	-		AO353_13005	0.54	+2.3
2,879,872	-		AO353_13005	0.54	+2.5
2,879,872	-		AO353_13005	0.54	+2.3
2,879,872	-		AO353_13005	0.54	+2.3
2,879,872	-		AO353_13005	0.54	+3.4
2,879,872	-		AO353_13005	0.54	+2.6
2,879,958	+		AO353_13005	0.60	+2.9
2,879,959	-		AO353_13005	0.60	+3.1
2,879,959	-		AO353_13005	0.60	+1.3
2,879,959	-		AO353_13005	0.60	+3.1
2,880,102	+		AO353_13005	0.70	+3.2
2,880,102	+		AO353_13005	0.70	+2.9
2,880,240	+		AO353_13005	0.80	+2.3
2,880,240	+		AO353_13005	0.80	+2.0
2,880,240	+		AO353_13005	0.80	+0.5
2,880,240	+		AO353_13005	0.80	+2.5
2,880,240	+		AO353_13005	0.80	+2.6
2,880,240	+		AO353_13005	0.80	+2.7
2,880,240	+		AO353_13005	0.80	+1.0
2,880,240	+		AO353_13005	0.80	+2.4
2,880,241	-		AO353_13005	0.80	+3.0
2,880,241	-		AO353_13005	0.80	+3.5
2,880,241	-		AO353_13005	0.80	+2.6
2,880,241	-		AO353_13005	0.80	+1.5
2,880,241	-		AO353_13005	0.80	+2.3
2,880,241	-		AO353_13005	0.80	+3.1
2,880,426	+				+3.2
2,880,545	-				+0.4
2,880,553	+				+2.2
2,880,557	-				+1.0
2,880,564	+				+1.6
2,880,565	-				+0.5
2,880,630	+				+0.8
2,880,630	+				+2.0
2,880,630	+				-1.5
2,880,630	+				+0.7
2,880,630	+				+0.6
2,880,630	+				-1.2
2,880,630	+				+0.4
2,880,630	+				-0.2
2,880,631	-				+0.3
2,880,631	-				-1.6
2,880,631	-				-0.3
2,880,631	-				-2.3
2,880,631	-				-0.6
2,880,631	-				-0.1
2,880,660	+				+2.0
2,880,660	+				+0.3
2,880,660	+				+0.3
2,880,660	+				-1.6
2,880,660	+				-0.3
2,880,661	-				-0.2
2,880,661	-				+0.0
2,880,664	+				+0.7
2,880,664	+				-0.2
2,880,664	+				+0.8
2,880,664	+				+1.3
2,880,664	+				+0.6
2,880,665	-				+0.3
2,880,665	-				+1.4
2,880,665	-				+0.3
2,880,665	-				-1.0
2,880,665	-				-0.1
2,880,683	+				+1.6
2,880,683	+				-1.0
2,880,683	+				-0.2
2,880,683	+				-0.2
2,880,683	+				-1.4
2,880,683	+				-0.4
2,880,683	+				+1.0
2,880,683	+				-1.0
2,880,683	+				+2.9
2,880,683	+				-1.3
2,880,683	+				+0.8
2,880,683	+				-0.8
2,880,683	+				-1.2
2,880,683	+				+1.1
2,880,683	+				+1.1
2,880,684	-				-0.1
2,880,684	-				-2.4
2,880,684	-				+0.2
2,880,684	-				-2.0
2,880,684	-				-0.5
2,880,684	-				+0.7
2,880,684	-				-0.3
2,880,720	-				-1.4
2,880,720	-				-0.7
2,880,752	+				+0.4
2,880,752	+				+1.1
2,880,752	+				+0.0
2,880,753	-				+0.0
2,880,753	-				-1.0
2,880,753	-				-0.3
2,880,753	-				-0.9
2,880,753	-				+0.3
2,880,753	-				+0.4
2,880,753	-				-1.1
2,880,753	-				-1.2
2,880,770	+				+1.0
2,880,771	-				+0.3
2,880,802	+				-1.1
2,880,802	+				-1.8
2,880,802	+				-0.4
2,880,802	+				-1.6
2,880,802	+				+0.1
2,880,802	+				-0.4
2,880,803	-				-0.0
2,880,803	-				-1.1
2,880,803	-				+0.0
2,880,951	+				-0.3
2,881,011	+				+0.8
2,881,011	+				-0.7
2,881,012	-				-0.5
2,881,012	-				+0.2
2,881,012	-				+0.4
2,881,099	+				+1.9
2,881,100	-				+0.0
2,881,204	+		AO353_13010	0.10	-0.2
2,881,205	-		AO353_13010	0.11	-1.7
2,881,205	-		AO353_13010	0.11	-0.5
2,881,205	-		AO353_13010	0.11	-1.3
2,881,205	-		AO353_13010	0.11	+0.3
2,881,222	+		AO353_13010	0.11	+2.2
2,881,223	-		AO353_13010	0.11	+0.7
2,881,223	-		AO353_13010	0.11	-0.4
2,881,438	+		AO353_13010	0.23	-0.5
2,881,438	+		AO353_13010	0.23	-0.2
2,881,438	+		AO353_13010	0.23	-0.7
2,881,438	+		AO353_13010	0.23	-0.4
2,881,439	-		AO353_13010	0.23	+0.3
2,881,439	-		AO353_13010	0.23	+1.1
2,881,439	-		AO353_13010	0.23	-0.3
2,881,474	+		AO353_13010	0.25	-1.0
2,881,474	+		AO353_13010	0.25	+0.9
2,881,474	+		AO353_13010	0.25	-1.1
2,881,474	+		AO353_13010	0.25	+0.9
2,881,474	+		AO353_13010	0.25	+0.7
2,881,474	+		AO353_13010	0.25	+0.8
2,881,474	+		AO353_13010	0.25	-0.0
2,881,475	-		AO353_13010	0.25	+0.3
2,881,475	-		AO353_13010	0.25	-0.4
2,881,475	-		AO353_13010	0.25	+1.0
2,881,475	-		AO353_13010	0.25	+0.0
2,881,475	-		AO353_13010	0.25	-1.2