Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12410

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,727,358	+		AO353_12405	0.52	+0.8
2,727,358	+		AO353_12405	0.52	+0.6
2,727,359	-		AO353_12405	0.52	+0.6
2,727,481	+		AO353_12405	0.59	-0.6
2,727,482	-		AO353_12405	0.59	-0.1
2,727,482	-		AO353_12405	0.59	+0.2
2,727,484	+		AO353_12405	0.59	-0.5
2,727,484	+		AO353_12405	0.59	-0.4
2,727,484	+		AO353_12405	0.59	-0.9
2,727,484	+		AO353_12405	0.59	-0.4
2,727,484	+		AO353_12405	0.59	+0.1
2,727,484	+		AO353_12405	0.59	-0.1
2,727,484	+		AO353_12405	0.59	+0.7
2,727,484	+		AO353_12405	0.59	-0.2
2,727,485	-		AO353_12405	0.59	+1.8
2,727,526	+		AO353_12405	0.62	+0.1
2,727,550	+		AO353_12405	0.63	-0.2
2,727,550	+		AO353_12405	0.63	-0.9
2,727,550	+		AO353_12405	0.63	+0.0
2,727,550	+		AO353_12405	0.63	-0.2
2,727,550	+		AO353_12405	0.63	-0.3
2,727,550	+		AO353_12405	0.63	+0.7
2,727,551	-		AO353_12405	0.63	-0.9
2,727,753	+		AO353_12405	0.75	-0.4
2,727,753	+		AO353_12405	0.75	-0.6
2,727,754	-		AO353_12405	0.75	-0.1
2,727,754	-		AO353_12405	0.75	+0.3
2,727,877	+		AO353_12405	0.83	-1.7
2,727,877	+		AO353_12405	0.83	-0.9
2,727,877	+		AO353_12405	0.83	+1.2
2,727,877	+		AO353_12405	0.83	-0.4
2,727,877	+		AO353_12405	0.83	-0.2
2,727,878	-		AO353_12405	0.83	-1.1
2,727,975	+		AO353_12405	0.89	-0.4
2,727,975	+		AO353_12405	0.89	-1.1
2,727,975	+		AO353_12405	0.89	-0.6
2,727,975	+		AO353_12405	0.89	+0.7
2,727,975	+		AO353_12405	0.89	-0.4
2,727,976	-		AO353_12405	0.89	+1.2
2,727,976	-		AO353_12405	0.89	-0.8
2,727,978	+		AO353_12405	0.89	+0.3
2,727,979	-		AO353_12405	0.89	-0.7
2,728,200	+				-0.4
2,728,200	+				+0.7
2,728,200	+				+0.8
2,728,200	+				+0.6
2,728,200	+				+0.6
2,728,200	+				+1.2
2,728,200	+				+0.5
2,728,200	+				-0.4
2,728,201	-				-0.2
2,728,201	-				-2.5
2,728,201	-				+0.1
2,728,201	-				+0.1
2,728,201	-				-0.7
2,728,201	-				+0.0
2,728,201	-				-1.6
2,728,201	-				-1.3
2,728,215	+				-0.2
2,728,224	+				+0.2
2,728,225	-				-1.3
2,728,225	-				-1.0
2,728,270	+				-0.4
2,728,270	+				+0.3
2,728,270	+				-1.0
2,728,270	+				+0.7
2,728,270	+				-0.2
2,728,270	+				-0.8
2,728,270	+				+0.3
2,728,270	+				+0.2
2,728,270	+				+0.7
2,728,270	+				+0.0
2,728,271	-				-0.8
2,728,271	-				-0.4
2,728,271	-				-1.1
2,728,271	-				+0.5
2,728,271	-				+0.0
2,728,271	-				+0.0
2,728,271	-				-0.8
2,728,271	-				-0.2
2,728,277	+				-0.4
2,728,277	+				+0.3
2,728,277	+				-0.9
2,728,277	+				+1.4
2,728,277	+				-1.7
2,728,277	+				-1.5
2,728,277	+				+0.1
2,728,277	+				-0.2
2,728,277	+				-0.5
2,728,277	+				+0.7
2,728,277	+				+1.1
2,728,277	+				+0.5
2,728,278	-				+0.0
2,728,278	-				-0.7
2,728,278	-				-1.3
2,728,282	+				-0.2
2,728,282	+				-0.4
2,728,282	+				-0.2
2,728,282	+				-0.7
2,728,282	+				-0.7
2,728,282	+				-0.1
2,728,282	+				+1.0
2,728,282	+				+1.0
2,728,282	+				+0.2
2,728,282	+				-1.8
2,728,282	+				-1.4
2,728,282	+				-0.3
2,728,282	+				-0.7
2,728,282	+				-0.9
2,728,283	-				-1.0
2,728,283	-				-0.9
2,728,283	-				+0.9
2,728,283	-				-0.4
2,728,283	-				-0.3
2,728,283	-				-0.6
2,728,283	-				-0.2
2,728,283	-				+0.4
2,728,283	-				-0.9
2,728,283	-				+0.1
2,728,283	-				+0.3
2,728,392	+		AO353_12410	0.13	-0.7
2,728,392	+		AO353_12410	0.13	-0.3
2,728,392	+		AO353_12410	0.13	+0.3
2,728,392	+		AO353_12410	0.13	-1.0
2,728,392	+		AO353_12410	0.13	+0.1
2,728,392	+		AO353_12410	0.13	+1.4
2,728,392	+		AO353_12410	0.13	+0.8
2,728,393	-		AO353_12410	0.13	-0.3
2,728,393	-		AO353_12410	0.13	+1.6
2,728,393	-		AO353_12410	0.13	-0.3
2,728,393	-		AO353_12410	0.13	+0.8
2,728,393	-		AO353_12410	0.13	-0.0
2,728,410	+		AO353_12410	0.15	-0.2
2,728,410	+		AO353_12410	0.15	+0.3
2,728,410	+		AO353_12410	0.15	+0.3
2,728,410	+		AO353_12410	0.15	-1.0
2,728,410	+		AO353_12410	0.15	-1.3
2,728,410	+		AO353_12410	0.15	-0.0
2,728,410	+		AO353_12410	0.15	+0.1
2,728,410	+		AO353_12410	0.15	+0.2
2,728,410	+		AO353_12410	0.15	+0.8
2,728,410	+		AO353_12410	0.15	+0.4
2,728,410	+		AO353_12410	0.15	-0.3
2,728,410	+		AO353_12410	0.15	-0.9
2,728,410	+		AO353_12410	0.15	-0.2
2,728,410	+		AO353_12410	0.15	+0.4
2,728,411	-		AO353_12410	0.15	-0.9
2,728,411	-		AO353_12410	0.15	+0.8
2,728,411	-		AO353_12410	0.15	-0.6
2,728,411	-		AO353_12410	0.15	-1.2
2,728,411	-		AO353_12410	0.15	-1.1
2,728,416	+		AO353_12410	0.16	+1.8
2,728,416	+		AO353_12410	0.16	-0.2
2,728,416	+		AO353_12410	0.16	+0.7
2,728,416	+		AO353_12410	0.16	-0.0
2,728,416	+		AO353_12410	0.16	+0.6
2,728,417	-		AO353_12410	0.16	-0.8
2,728,417	-		AO353_12410	0.16	-1.0
2,728,417	-		AO353_12410	0.16	-2.4
2,728,417	-		AO353_12410	0.16	+0.2
2,728,417	-		AO353_12410	0.16	+0.5
2,728,433	+		AO353_12410	0.18	+0.4
2,728,433	+		AO353_12410	0.18	+0.6
2,728,434	-		AO353_12410	0.18	+0.7
2,728,434	-		AO353_12410	0.18	+0.3
2,728,434	-		AO353_12410	0.18	+0.3
2,728,454	+		AO353_12410	0.20	+0.1
2,728,567	+		AO353_12410	0.33	-0.9
2,728,567	+		AO353_12410	0.33	-1.2
2,728,568	-		AO353_12410	0.33	+0.4
2,728,570	+		AO353_12410	0.34	+0.4
2,728,648	+		AO353_12410	0.43	-0.1
2,728,648	+		AO353_12410	0.43	+0.0
2,728,648	+		AO353_12410	0.43	-0.1
2,728,690	+		AO353_12410	0.48	+2.1
2,728,690	+		AO353_12410	0.48	+0.3
2,728,690	+		AO353_12410	0.48	+1.2
2,728,690	+		AO353_12410	0.48	-1.0
2,728,690	+		AO353_12410	0.48	-0.3
2,728,690	+		AO353_12410	0.48	-1.7
2,728,690	+		AO353_12410	0.48	-0.3
2,728,690	+		AO353_12410	0.48	+0.5
2,728,691	-		AO353_12410	0.48	+0.8
2,728,691	-		AO353_12410	0.48	+0.8
2,728,691	-		AO353_12410	0.48	-0.4
2,728,691	-		AO353_12410	0.48	-0.3
2,728,691	-		AO353_12410	0.48	+1.3
2,728,691	-		AO353_12410	0.48	+0.2
2,728,870	+		AO353_12410	0.69	-0.4
2,728,870	+		AO353_12410	0.69	-0.8
2,728,870	+		AO353_12410	0.69	+0.1
2,729,121	+				-0.7
2,729,121	+				+0.7
2,729,121	+				-0.1
2,729,122	-				-1.3
2,729,122	-				-0.5
2,729,122	-				-0.9
2,729,173	-				-0.4
2,729,173	-				+0.1
2,729,252	+				-0.8
2,729,252	+				+0.0
2,729,253	-				+1.4
2,729,253	-				-0.1
2,729,253	-				-0.1
2,729,253	-				-0.2
2,729,267	+				+0.2
2,729,267	+				-0.3
2,729,267	+				+2.3
2,729,267	+				+0.8
2,729,267	+				+0.2
2,729,267	+				-0.7
2,729,267	+				+0.1
2,729,267	+				+0.1
2,729,267	+				+0.4
2,729,267	+				-0.8
2,729,267	+				-1.0
2,729,267	+				+0.3
2,729,267	+				+0.3
2,729,267	+				-1.1
2,729,267	+				-1.6
2,729,267	+				-0.7
2,729,267	+				-0.2
2,729,267	+				+0.7
2,729,268	-				+0.5
2,729,268	-				+0.4
2,729,268	-				+2.1
2,729,268	-				+1.1
2,729,268	-				-0.5
2,729,268	-				-1.3
2,729,268	-				+0.9
2,729,268	-				-0.8
2,729,268	-				-1.1
2,729,297	+				-0.2
2,729,297	+				-0.5
2,729,297	+				+1.1
2,729,297	+				+0.1
2,729,297	+				+1.7
2,729,297	+				-0.2
2,729,297	+				+0.3
2,729,297	+				+0.7
2,729,297	+				+0.9
2,729,298	-				-0.6
2,729,298	-				+0.6
2,729,298	-				+0.7
2,729,298	-				+0.1
2,729,298	-				-0.5
2,729,298	-				-0.3
2,729,315	-				+0.1
2,729,450	+		AO353_12415	0.12	+0.6
2,729,451	-		AO353_12415	0.12	-0.3
2,729,552	+		AO353_12415	0.18	-1.0
2,729,552	+		AO353_12415	0.18	-0.5
2,729,553	-		AO353_12415	0.18	+0.8
2,729,553	-		AO353_12415	0.18	+1.7
2,729,600	+		AO353_12415	0.21	-0.2
2,729,600	+		AO353_12415	0.21	-0.5
2,729,600	+		AO353_12415	0.21	-0.4
2,729,600	+		AO353_12415	0.21	+0.1
2,729,601	-		AO353_12415	0.21	+1.3
2,729,601	-		AO353_12415	0.21	-0.3
2,729,601	-		AO353_12415	0.21	+1.2
2,729,637	+		AO353_12415	0.23	+1.1
2,729,783	+		AO353_12415	0.32	+0.6
2,729,784	-		AO353_12415	0.32	-0.7
2,729,784	-		AO353_12415	0.32	+1.7
2,729,784	-		AO353_12415	0.32	+0.8
2,729,784	-		AO353_12415	0.32	+0.7
2,729,784	-		AO353_12415	0.32	+0.4
2,729,784	-		AO353_12415	0.32	+2.3
2,729,784	-		AO353_12415	0.32	+0.9
2,729,784	-		AO353_12415	0.32	-0.2
2,729,784	-		AO353_12415	0.32	+0.3
2,729,784	-		AO353_12415	0.32	+0.9
2,729,799	-		AO353_12415	0.33	-2.5
2,729,799	-		AO353_12415	0.33	-0.6
2,729,799	-		AO353_12415	0.33	-2.2
2,729,876	+		AO353_12415	0.37	-0.6
2,729,877	-		AO353_12415	0.37	+0.3
2,729,877	-		AO353_12415	0.37	+0.2
2,730,122	+		AO353_12415	0.52	-0.2
2,730,122	+		AO353_12415	0.52	+0.3
2,730,122	+		AO353_12415	0.52	-1.0
2,730,123	-		AO353_12415	0.52	+0.9
2,730,123	-		AO353_12415	0.52	-0.7