Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12405

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,725,533	-				+1.3
2,725,658	+				+1.0
2,725,659	-				-1.3
2,725,698	+				-1.1
2,725,717	+				-2.1
2,725,717	+				-0.6
2,725,717	+				-1.7
2,725,718	-				-0.3
2,725,718	-				+0.1
2,725,718	-				-0.1
2,725,718	-				+0.6
2,725,724	+				-0.7
2,725,724	+				-0.4
2,725,724	+				+1.4
2,725,724	+				+1.8
2,725,724	+				+0.9
2,725,724	+				-0.5
2,725,724	+				+0.8
2,725,724	+				+0.9
2,725,725	-				-0.2
2,725,725	-				+0.2
2,725,725	-				+0.4
2,725,725	-				+0.6
2,725,725	-				+0.3
2,725,725	-				-1.2
2,725,725	-				+0.9
2,725,820	+				+0.6
2,725,820	+				-0.7
2,725,821	-				+0.5
2,725,821	-				+1.5
2,725,821	-				+0.9
2,725,895	+		AO353_12400	0.15	-0.3
2,725,896	-		AO353_12400	0.15	+0.8
2,725,896	-		AO353_12400	0.15	-0.6
2,725,940	+		AO353_12400	0.22	+1.4
2,725,940	+		AO353_12400	0.22	+0.5
2,726,147	+		AO353_12400	0.56	+2.3
2,726,190	-		AO353_12400	0.63	-0.3
2,726,300	+		AO353_12400	0.80	-0.3
2,726,300	+		AO353_12400	0.80	+0.2
2,726,300	+		AO353_12400	0.80	+0.4
2,726,300	+		AO353_12400	0.80	+1.0
2,726,301	-		AO353_12400	0.81	+0.1
2,726,301	-		AO353_12400	0.81	-0.4
2,726,301	-		AO353_12400	0.81	+0.7
2,726,301	-		AO353_12400	0.81	+0.6
2,726,303	+		AO353_12400	0.81	-0.1
2,726,303	+		AO353_12400	0.81	+0.9
2,726,303	+		AO353_12400	0.81	+0.3
2,726,303	+		AO353_12400	0.81	-0.9
2,726,303	+		AO353_12400	0.81	+0.4
2,726,303	+		AO353_12400	0.81	+0.8
2,726,303	+		AO353_12400	0.81	-0.2
2,726,303	+		AO353_12400	0.81	-0.0
2,726,303	+		AO353_12400	0.81	+0.0
2,726,303	+		AO353_12400	0.81	+1.2
2,726,303	+		AO353_12400	0.81	+0.8
2,726,303	+		AO353_12400	0.81	-0.6
2,726,304	-		AO353_12400	0.81	-1.0
2,726,304	-		AO353_12400	0.81	-1.0
2,726,304	-		AO353_12400	0.81	-0.1
2,726,349	+		AO353_12400	0.88	+0.1
2,726,349	+		AO353_12400	0.88	-1.1
2,726,350	-		AO353_12400	0.88	-0.2
2,726,350	-		AO353_12400	0.88	-0.9
2,726,350	-		AO353_12400	0.88	-1.3
2,726,432	+				+0.7
2,726,433	-				-0.4
2,726,433	-				-2.4
2,726,491	-				-0.4
2,726,500	+				+0.3
2,726,500	+				+0.2
2,726,500	+				-0.8
2,726,500	+				+0.7
2,726,501	-				+0.5
2,726,501	-				-1.7
2,726,501	-				+0.4
2,726,501	-				+0.6
2,726,501	-				-1.7
2,726,501	-				-0.3
2,726,501	-				+0.7
2,726,501	-				-1.0
2,726,501	-				+0.2
2,726,501	-				-1.0
2,726,501	-				+0.4
2,726,501	-				+0.4
2,726,501	-				-0.9
2,726,501	-				+2.4
2,726,530	+				-0.2
2,726,530	+				-0.9
2,726,530	+				+1.3
2,726,530	+				+0.1
2,726,530	+				+0.6
2,726,530	+				-0.1
2,726,530	+				-0.4
2,726,530	+				+1.1
2,726,530	+				-0.7
2,726,531	-				+0.6
2,726,531	-				+1.0
2,726,531	-				-0.5
2,726,531	-				-0.5
2,726,639	-				-1.0
2,726,642	-				+0.6
2,726,642	-				+0.3
2,726,683	+		AO353_12405	0.12	+0.3
2,726,683	+		AO353_12405	0.12	-0.6
2,726,683	+		AO353_12405	0.12	-0.1
2,726,683	+		AO353_12405	0.12	-0.3
2,726,683	+		AO353_12405	0.12	-0.1
2,726,683	+		AO353_12405	0.12	-0.3
2,726,683	+		AO353_12405	0.12	-0.5
2,726,683	+		AO353_12405	0.12	+0.2
2,726,683	+		AO353_12405	0.12	-0.7
2,726,683	+		AO353_12405	0.12	-0.7
2,726,684	-		AO353_12405	0.12	+0.3
2,726,684	-		AO353_12405	0.12	+0.8
2,726,684	-		AO353_12405	0.12	+0.2
2,726,684	-		AO353_12405	0.12	-0.4
2,726,684	-		AO353_12405	0.12	+0.8
2,727,017	-		AO353_12405	0.32	-0.8
2,727,017	-		AO353_12405	0.32	+1.1
2,727,017	-		AO353_12405	0.32	+0.4
2,727,017	-		AO353_12405	0.32	-0.9
2,727,017	-		AO353_12405	0.32	+1.7
2,727,017	-		AO353_12405	0.32	+0.3
2,727,069	+		AO353_12405	0.35	+1.3
2,727,199	+		AO353_12405	0.42	-1.4
2,727,199	+		AO353_12405	0.42	+1.7
2,727,199	+		AO353_12405	0.42	+0.2
2,727,199	+		AO353_12405	0.42	-1.0
2,727,199	+		AO353_12405	0.42	+0.4
2,727,199	+		AO353_12405	0.42	+0.1
2,727,200	-		AO353_12405	0.43	-2.5
2,727,200	-		AO353_12405	0.43	-1.3
2,727,200	-		AO353_12405	0.43	+0.1
2,727,200	-		AO353_12405	0.43	-1.1
2,727,200	-		AO353_12405	0.43	-0.3
2,727,200	-		AO353_12405	0.43	-0.5
2,727,200	-		AO353_12405	0.43	+1.3
2,727,200	-		AO353_12405	0.43	+1.5
2,727,358	+		AO353_12405	0.52	+0.8
2,727,358	+		AO353_12405	0.52	+0.6
2,727,359	-		AO353_12405	0.52	+0.6
2,727,481	+		AO353_12405	0.59	-0.6
2,727,482	-		AO353_12405	0.59	-0.1
2,727,482	-		AO353_12405	0.59	+0.2
2,727,484	+		AO353_12405	0.59	-0.5
2,727,484	+		AO353_12405	0.59	-0.4
2,727,484	+		AO353_12405	0.59	-0.9
2,727,484	+		AO353_12405	0.59	-0.4
2,727,484	+		AO353_12405	0.59	+0.1
2,727,484	+		AO353_12405	0.59	-0.1
2,727,484	+		AO353_12405	0.59	+0.7
2,727,484	+		AO353_12405	0.59	-0.2
2,727,485	-		AO353_12405	0.59	+1.8
2,727,526	+		AO353_12405	0.62	+0.1
2,727,550	+		AO353_12405	0.63	-0.2
2,727,550	+		AO353_12405	0.63	-0.9
2,727,550	+		AO353_12405	0.63	+0.0
2,727,550	+		AO353_12405	0.63	-0.2
2,727,550	+		AO353_12405	0.63	-0.3
2,727,550	+		AO353_12405	0.63	+0.7
2,727,551	-		AO353_12405	0.63	-0.9
2,727,753	+		AO353_12405	0.75	-0.4
2,727,753	+		AO353_12405	0.75	-0.6
2,727,754	-		AO353_12405	0.75	-0.1
2,727,754	-		AO353_12405	0.75	+0.3
2,727,877	+		AO353_12405	0.83	-1.7
2,727,877	+		AO353_12405	0.83	-0.9
2,727,877	+		AO353_12405	0.83	+1.2
2,727,877	+		AO353_12405	0.83	-0.4
2,727,877	+		AO353_12405	0.83	-0.2
2,727,878	-		AO353_12405	0.83	-1.1
2,727,975	+		AO353_12405	0.89	-0.4
2,727,975	+		AO353_12405	0.89	-1.1
2,727,975	+		AO353_12405	0.89	-0.6
2,727,975	+		AO353_12405	0.89	+0.7
2,727,975	+		AO353_12405	0.89	-0.4
2,727,976	-		AO353_12405	0.89	+1.2
2,727,976	-		AO353_12405	0.89	-0.8
2,727,978	+		AO353_12405	0.89	+0.3
2,727,979	-		AO353_12405	0.89	-0.7
2,728,200	+				-0.4
2,728,200	+				+0.7
2,728,200	+				+0.8
2,728,200	+				+0.6
2,728,200	+				+0.6
2,728,200	+				+1.2
2,728,200	+				+0.5
2,728,200	+				-0.4
2,728,201	-				-0.2
2,728,201	-				-2.5
2,728,201	-				+0.1
2,728,201	-				+0.1
2,728,201	-				-0.7
2,728,201	-				+0.0
2,728,201	-				-1.6
2,728,201	-				-1.3
2,728,215	+				-0.2
2,728,224	+				+0.2
2,728,225	-				-1.3
2,728,225	-				-1.0
2,728,270	+				-0.4
2,728,270	+				+0.3
2,728,270	+				-1.0
2,728,270	+				+0.7
2,728,270	+				-0.2
2,728,270	+				-0.8
2,728,270	+				+0.3
2,728,270	+				+0.2
2,728,270	+				+0.7
2,728,270	+				+0.0
2,728,271	-				-0.8
2,728,271	-				-0.4
2,728,271	-				-1.1
2,728,271	-				+0.5
2,728,271	-				+0.0
2,728,271	-				+0.0
2,728,271	-				-0.8
2,728,271	-				-0.2
2,728,277	+				-0.4
2,728,277	+				+0.3
2,728,277	+				-0.9
2,728,277	+				+1.4
2,728,277	+				-1.7
2,728,277	+				-1.5
2,728,277	+				+0.1
2,728,277	+				-0.2
2,728,277	+				-0.5
2,728,277	+				+0.7
2,728,277	+				+1.1
2,728,277	+				+0.5
2,728,278	-				+0.0
2,728,278	-				-0.7
2,728,278	-				-1.3
2,728,282	+				-0.2
2,728,282	+				-0.4
2,728,282	+				-0.2
2,728,282	+				-0.7
2,728,282	+				-0.7
2,728,282	+				-0.1
2,728,282	+				+1.0
2,728,282	+				+1.0
2,728,282	+				+0.2
2,728,282	+				-1.8
2,728,282	+				-1.4
2,728,282	+				-0.3
2,728,282	+				-0.7
2,728,282	+				-0.9
2,728,283	-				-1.0
2,728,283	-				-0.9
2,728,283	-				+0.9
2,728,283	-				-0.4
2,728,283	-				-0.3
2,728,283	-				-0.6
2,728,283	-				-0.2
2,728,283	-				+0.4
2,728,283	-				-0.9
2,728,283	-				+0.1
2,728,283	-				+0.3
2,728,392	+		AO353_12410	0.13	-0.7
2,728,392	+		AO353_12410	0.13	-0.3
2,728,392	+		AO353_12410	0.13	+0.3
2,728,392	+		AO353_12410	0.13	-1.0
2,728,392	+		AO353_12410	0.13	+0.1
2,728,392	+		AO353_12410	0.13	+1.4
2,728,392	+		AO353_12410	0.13	+0.8
2,728,393	-		AO353_12410	0.13	-0.3
2,728,393	-		AO353_12410	0.13	+1.6
2,728,393	-		AO353_12410	0.13	-0.3
2,728,393	-		AO353_12410	0.13	+0.8
2,728,393	-		AO353_12410	0.13	-0.0
2,728,410	+		AO353_12410	0.15	-0.2
2,728,410	+		AO353_12410	0.15	+0.3
2,728,410	+		AO353_12410	0.15	+0.3
2,728,410	+		AO353_12410	0.15	-1.0
2,728,410	+		AO353_12410	0.15	-1.3
2,728,410	+		AO353_12410	0.15	-0.0
2,728,410	+		AO353_12410	0.15	+0.1
2,728,410	+		AO353_12410	0.15	+0.2
2,728,410	+		AO353_12410	0.15	+0.8
2,728,410	+		AO353_12410	0.15	+0.4
2,728,410	+		AO353_12410	0.15	-0.3
2,728,410	+		AO353_12410	0.15	-0.9
2,728,410	+		AO353_12410	0.15	-0.2
2,728,410	+		AO353_12410	0.15	+0.4
2,728,411	-		AO353_12410	0.15	-0.9
2,728,411	-		AO353_12410	0.15	+0.8
2,728,411	-		AO353_12410	0.15	-0.6
2,728,411	-		AO353_12410	0.15	-1.2
2,728,411	-		AO353_12410	0.15	-1.1
2,728,416	+		AO353_12410	0.16	+1.8
2,728,416	+		AO353_12410	0.16	-0.2
2,728,416	+		AO353_12410	0.16	+0.7
2,728,416	+		AO353_12410	0.16	-0.0
2,728,416	+		AO353_12410	0.16	+0.6
2,728,417	-		AO353_12410	0.16	-0.8
2,728,417	-		AO353_12410	0.16	-1.0
2,728,417	-		AO353_12410	0.16	-2.4
2,728,417	-		AO353_12410	0.16	+0.2
2,728,417	-		AO353_12410	0.16	+0.5
2,728,433	+		AO353_12410	0.18	+0.4
2,728,433	+		AO353_12410	0.18	+0.6
2,728,434	-		AO353_12410	0.18	+0.7
2,728,434	-		AO353_12410	0.18	+0.3
2,728,434	-		AO353_12410	0.18	+0.3
2,728,454	+		AO353_12410	0.20	+0.1
2,728,567	+		AO353_12410	0.33	-0.9
2,728,567	+		AO353_12410	0.33	-1.2
2,728,568	-		AO353_12410	0.33	+0.4
2,728,570	+		AO353_12410	0.34	+0.4
2,728,648	+		AO353_12410	0.43	-0.1
2,728,648	+		AO353_12410	0.43	+0.0
2,728,648	+		AO353_12410	0.43	-0.1
2,728,690	+		AO353_12410	0.48	+2.1
2,728,690	+		AO353_12410	0.48	+0.3
2,728,690	+		AO353_12410	0.48	+1.2
2,728,690	+		AO353_12410	0.48	-1.0
2,728,690	+		AO353_12410	0.48	-0.3
2,728,690	+		AO353_12410	0.48	-1.7
2,728,690	+		AO353_12410	0.48	-0.3
2,728,690	+		AO353_12410	0.48	+0.5
2,728,691	-		AO353_12410	0.48	+0.8
2,728,691	-		AO353_12410	0.48	+0.8
2,728,691	-		AO353_12410	0.48	-0.4
2,728,691	-		AO353_12410	0.48	-0.3
2,728,691	-		AO353_12410	0.48	+1.3
2,728,691	-		AO353_12410	0.48	+0.2
2,728,870	+		AO353_12410	0.69	-0.4
2,728,870	+		AO353_12410	0.69	-0.8
2,728,870	+		AO353_12410	0.69	+0.1
2,729,121	+				-0.7
2,729,121	+				+0.7
2,729,121	+				-0.1
2,729,122	-				-1.3
2,729,122	-				-0.5
2,729,122	-				-0.9