Experiment: Formate with Bacitracin 15.6 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS07155 and MMP_RS09030 are separated by 107 nucleotides MMP_RS09030 and MMP_RS07160 are separated by 133 nucleotides
MMP_RS07155: MMP_RS07155 - MFS transporter, at 1,368,288 to 1,369,436
_RS07155
MMP_RS09030: MMP_RS09030 - hypothetical protein, at 1,369,544 to 1,369,714
_RS09030
MMP_RS07160: MMP_RS07160 - aspartate-semialdehyde dehydrogenase, at 1,369,848 to 1,370,894
_RS07160
Position (kb)
1369
1370 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1368.551 kb on + strand, within MMP_RS07155 at 1368.745 kb on - strand, within MMP_RS07155 at 1368.784 kb on + strand, within MMP_RS07155 at 1368.923 kb on - strand, within MMP_RS07155 at 1368.944 kb on + strand, within MMP_RS07155 at 1368.976 kb on + strand, within MMP_RS07155 at 1369.018 kb on - strand, within MMP_RS07155 at 1369.316 kb on - strand, within MMP_RS07155 at 1369.409 kb on + strand at 1369.431 kb on - strand at 1369.455 kb on - strand at 1369.456 kb on + strand at 1369.459 kb on - strand at 1369.459 kb on - strand at 1369.479 kb on + strand at 1369.491 kb on - strand at 1369.494 kb on - strand at 1369.495 kb on + strand at 1369.495 kb on + strand at 1369.571 kb on + strand, within MMP_RS09030 at 1369.646 kb on - strand, within MMP_RS09030 at 1369.647 kb on + strand, within MMP_RS09030 at 1369.647 kb on + strand, within MMP_RS09030 at 1369.658 kb on - strand, within MMP_RS09030 at 1369.659 kb on + strand, within MMP_RS09030 at 1369.666 kb on + strand, within MMP_RS09030 at 1369.669 kb on - strand, within MMP_RS09030 at 1369.669 kb on - strand, within MMP_RS09030 at 1369.669 kb on - strand, within MMP_RS09030 at 1369.681 kb on - strand, within MMP_RS09030 at 1369.728 kb on - strand at 1369.729 kb on + strand at 1369.729 kb on + strand at 1369.731 kb on - strand at 1369.736 kb on - strand at 1369.736 kb on - strand at 1369.789 kb on - strand at 1369.790 kb on + strand at 1369.790 kb on + strand at 1369.911 kb on + strand at 1369.934 kb on + strand at 1370.154 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with Bacitracin 15.6 uM remove 1,368,551 + MMP_RS07155 0.23 -1.0 1,368,745 - MMP_RS07155 0.40 +0.8 1,368,784 + MMP_RS07155 0.43 -1.1 1,368,923 - MMP_RS07155 0.55 +0.2 1,368,944 + MMP_RS07155 0.57 -0.6 1,368,976 + MMP_RS07155 0.60 +1.0 1,369,018 - MMP_RS07155 0.64 -0.4 1,369,316 - MMP_RS07155 0.89 -0.2 1,369,409 + +0.4 1,369,431 - -1.0 1,369,455 - -0.4 1,369,456 + -1.2 1,369,459 - -0.0 1,369,459 - -1.1 1,369,479 + -1.8 1,369,491 - -1.0 1,369,494 - +0.3 1,369,495 + -0.4 1,369,495 + +0.9 1,369,571 + MMP_RS09030 0.16 -0.2 1,369,646 - MMP_RS09030 0.60 -0.3 1,369,647 + MMP_RS09030 0.60 -1.6 1,369,647 + MMP_RS09030 0.60 +0.4 1,369,658 - MMP_RS09030 0.67 -1.0 1,369,659 + MMP_RS09030 0.67 -1.4 1,369,666 + MMP_RS09030 0.71 +0.2 1,369,669 - MMP_RS09030 0.73 -1.4 1,369,669 - MMP_RS09030 0.73 +0.2 1,369,669 - MMP_RS09030 0.73 -1.2 1,369,681 - MMP_RS09030 0.80 -3.5 1,369,728 - -1.1 1,369,729 + +0.2 1,369,729 + -1.0 1,369,731 - -0.5 1,369,736 - -1.7 1,369,736 - +1.8 1,369,789 - -2.1 1,369,790 + -0.5 1,369,790 + -0.2 1,369,911 + +0.6 1,369,934 + +2.0 1,370,154 + +2.0
Or see this region's nucleotide sequence