Experiment: Formate with Bacitracin 15.6 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS04065 and MMP_RS04070 overlap by 4 nucleotides MMP_RS04070 and MMP_RS04075 are separated by 1 nucleotides MMP_RS04075 and MMP_RS04080 are separated by 405 nucleotides
MMP_RS04065: MMP_RS04065 - hypothetical protein, at 768,715 to 770,745
_RS04065
MMP_RS04070: MMP_RS04070 - PEGA domain-containing protein, at 770,742 to 772,682
_RS04070
MMP_RS04075: MMP_RS04075 - hypothetical protein, at 772,684 to 773,019
_RS04075
MMP_RS04080: MMP_RS04080 - tRNA-Ser, at 773,425 to 773,511
_RS04080
Position (kb) 770
771
772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 769.754 kb on - strand, within MMP_RS04065 at 769.754 kb on - strand, within MMP_RS04065 at 769.754 kb on - strand, within MMP_RS04065 at 769.758 kb on + strand, within MMP_RS04065 at 769.758 kb on + strand, within MMP_RS04065 at 769.811 kb on + strand, within MMP_RS04065 at 769.811 kb on + strand, within MMP_RS04065 at 769.811 kb on + strand, within MMP_RS04065 at 769.816 kb on + strand, within MMP_RS04065 at 769.816 kb on + strand, within MMP_RS04065 at 769.816 kb on + strand, within MMP_RS04065 at 769.816 kb on + strand, within MMP_RS04065 at 769.829 kb on - strand, within MMP_RS04065 at 769.830 kb on + strand, within MMP_RS04065 at 769.996 kb on - strand, within MMP_RS04065 at 769.996 kb on - strand, within MMP_RS04065 at 770.104 kb on - strand, within MMP_RS04065 at 770.104 kb on - strand, within MMP_RS04065 at 770.105 kb on + strand, within MMP_RS04065 at 770.252 kb on - strand, within MMP_RS04065 at 770.343 kb on - strand, within MMP_RS04065 at 770.415 kb on + strand, within MMP_RS04065 at 770.415 kb on + strand, within MMP_RS04065 at 770.420 kb on - strand, within MMP_RS04065 at 770.432 kb on + strand, within MMP_RS04065 at 770.517 kb on + strand, within MMP_RS04065 at 770.588 kb on + strand at 770.654 kb on + strand at 770.852 kb on - strand at 770.852 kb on - strand at 770.859 kb on - strand at 770.866 kb on + strand at 770.932 kb on - strand at 770.933 kb on + strand at 770.941 kb on + strand, within MMP_RS04070 at 771.059 kb on - strand, within MMP_RS04070 at 771.059 kb on - strand, within MMP_RS04070 at 771.065 kb on + strand, within MMP_RS04070 at 771.148 kb on + strand, within MMP_RS04070 at 771.181 kb on - strand, within MMP_RS04070 at 771.189 kb on + strand, within MMP_RS04070 at 771.223 kb on - strand, within MMP_RS04070 at 771.224 kb on + strand, within MMP_RS04070 at 771.260 kb on + strand, within MMP_RS04070 at 771.319 kb on - strand, within MMP_RS04070 at 771.356 kb on - strand, within MMP_RS04070 at 771.356 kb on - strand, within MMP_RS04070 at 771.356 kb on - strand, within MMP_RS04070 at 771.356 kb on - strand, within MMP_RS04070 at 771.363 kb on - strand, within MMP_RS04070 at 771.378 kb on - strand, within MMP_RS04070 at 771.430 kb on + strand, within MMP_RS04070 at 771.430 kb on + strand, within MMP_RS04070 at 771.430 kb on + strand, within MMP_RS04070 at 771.430 kb on + strand, within MMP_RS04070 at 771.430 kb on + strand, within MMP_RS04070 at 771.434 kb on - strand, within MMP_RS04070 at 771.435 kb on + strand, within MMP_RS04070 at 771.435 kb on + strand, within MMP_RS04070 at 771.500 kb on - strand, within MMP_RS04070 at 771.557 kb on - strand, within MMP_RS04070 at 771.564 kb on - strand, within MMP_RS04070 at 771.565 kb on + strand, within MMP_RS04070 at 771.566 kb on - strand, within MMP_RS04070 at 771.580 kb on - strand, within MMP_RS04070 at 771.580 kb on - strand, within MMP_RS04070 at 771.580 kb on - strand, within MMP_RS04070 at 771.725 kb on - strand, within MMP_RS04070 at 771.725 kb on - strand, within MMP_RS04070 at 771.756 kb on - strand, within MMP_RS04070 at 771.798 kb on + strand, within MMP_RS04070 at 771.811 kb on + strand, within MMP_RS04070 at 771.863 kb on - strand, within MMP_RS04070 at 771.863 kb on - strand, within MMP_RS04070 at 771.863 kb on - strand, within MMP_RS04070 at 771.925 kb on - strand, within MMP_RS04070 at 771.963 kb on - strand, within MMP_RS04070 at 772.031 kb on - strand, within MMP_RS04070 at 772.042 kb on + strand, within MMP_RS04070 at 772.111 kb on - strand, within MMP_RS04070 at 772.117 kb on + strand, within MMP_RS04070 at 772.118 kb on - strand, within MMP_RS04070 at 772.127 kb on - strand, within MMP_RS04070 at 772.236 kb on - strand, within MMP_RS04070 at 772.237 kb on + strand, within MMP_RS04070 at 772.245 kb on + strand, within MMP_RS04070 at 772.264 kb on - strand, within MMP_RS04070 at 772.264 kb on - strand, within MMP_RS04070 at 772.265 kb on + strand, within MMP_RS04070 at 772.265 kb on + strand, within MMP_RS04070 at 772.265 kb on + strand, within MMP_RS04070 at 772.265 kb on + strand, within MMP_RS04070 at 772.265 kb on + strand, within MMP_RS04070 at 772.339 kb on + strand, within MMP_RS04070 at 772.341 kb on - strand, within MMP_RS04070 at 772.342 kb on + strand, within MMP_RS04070 at 772.373 kb on + strand, within MMP_RS04070 at 772.422 kb on - strand, within MMP_RS04070 at 772.423 kb on + strand, within MMP_RS04070 at 772.424 kb on - strand, within MMP_RS04070 at 772.462 kb on - strand, within MMP_RS04070 at 772.472 kb on - strand, within MMP_RS04070 at 772.539 kb on + strand at 773.208 kb on - strand at 773.251 kb on + strand at 773.386 kb on + strand at 773.630 kb on + strand at 773.633 kb on - strand at 773.633 kb on - strand at 773.635 kb on - strand at 773.636 kb on + strand at 773.636 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with Bacitracin 15.6 uM remove 769,754 - MMP_RS04065 0.51 -1.9 769,754 - MMP_RS04065 0.51 +0.6 769,754 - MMP_RS04065 0.51 -0.5 769,758 + MMP_RS04065 0.51 +0.7 769,758 + MMP_RS04065 0.51 +1.5 769,811 + MMP_RS04065 0.54 +0.3 769,811 + MMP_RS04065 0.54 -0.2 769,811 + MMP_RS04065 0.54 +1.2 769,816 + MMP_RS04065 0.54 -0.2 769,816 + MMP_RS04065 0.54 +0.4 769,816 + MMP_RS04065 0.54 +0.7 769,816 + MMP_RS04065 0.54 +1.7 769,829 - MMP_RS04065 0.55 -2.1 769,830 + MMP_RS04065 0.55 -0.2 769,996 - MMP_RS04065 0.63 +1.1 769,996 - MMP_RS04065 0.63 -1.2 770,104 - MMP_RS04065 0.68 +0.7 770,104 - MMP_RS04065 0.68 -0.8 770,105 + MMP_RS04065 0.68 -0.7 770,252 - MMP_RS04065 0.76 -1.7 770,343 - MMP_RS04065 0.80 -0.2 770,415 + MMP_RS04065 0.84 -0.3 770,415 + MMP_RS04065 0.84 +0.8 770,420 - MMP_RS04065 0.84 -0.7 770,432 + MMP_RS04065 0.85 -0.1 770,517 + MMP_RS04065 0.89 -0.1 770,588 + -0.5 770,654 + +0.7 770,852 - -1.3 770,852 - -0.3 770,859 - -0.3 770,866 + +0.9 770,932 - -1.5 770,933 + -0.2 770,941 + MMP_RS04070 0.10 +2.6 771,059 - MMP_RS04070 0.16 +2.5 771,059 - MMP_RS04070 0.16 +0.8 771,065 + MMP_RS04070 0.17 +0.3 771,148 + MMP_RS04070 0.21 -0.4 771,181 - MMP_RS04070 0.23 +0.3 771,189 + MMP_RS04070 0.23 -3.1 771,223 - MMP_RS04070 0.25 +0.0 771,224 + MMP_RS04070 0.25 -1.3 771,260 + MMP_RS04070 0.27 +0.1 771,319 - MMP_RS04070 0.30 -0.2 771,356 - MMP_RS04070 0.32 +2.0 771,356 - MMP_RS04070 0.32 -0.6 771,356 - MMP_RS04070 0.32 -0.0 771,356 - MMP_RS04070 0.32 +1.7 771,363 - MMP_RS04070 0.32 -0.2 771,378 - MMP_RS04070 0.33 -0.4 771,430 + MMP_RS04070 0.35 +0.1 771,430 + MMP_RS04070 0.35 -2.1 771,430 + MMP_RS04070 0.35 -0.3 771,430 + MMP_RS04070 0.35 -0.3 771,430 + MMP_RS04070 0.35 -0.4 771,434 - MMP_RS04070 0.36 -0.2 771,435 + MMP_RS04070 0.36 -1.7 771,435 + MMP_RS04070 0.36 +0.5 771,500 - MMP_RS04070 0.39 -1.4 771,557 - MMP_RS04070 0.42 -1.4 771,564 - MMP_RS04070 0.42 -0.4 771,565 + MMP_RS04070 0.42 -0.1 771,566 - MMP_RS04070 0.42 +2.0 771,580 - MMP_RS04070 0.43 +0.0 771,580 - MMP_RS04070 0.43 -2.3 771,580 - MMP_RS04070 0.43 -0.7 771,725 - MMP_RS04070 0.51 +1.2 771,725 - MMP_RS04070 0.51 +0.7 771,756 - MMP_RS04070 0.52 -0.7 771,798 + MMP_RS04070 0.54 -0.3 771,811 + MMP_RS04070 0.55 +0.3 771,863 - MMP_RS04070 0.58 -0.9 771,863 - MMP_RS04070 0.58 +1.2 771,863 - MMP_RS04070 0.58 +0.7 771,925 - MMP_RS04070 0.61 -0.2 771,963 - MMP_RS04070 0.63 +0.0 772,031 - MMP_RS04070 0.66 +0.7 772,042 + MMP_RS04070 0.67 -1.3 772,111 - MMP_RS04070 0.71 -0.2 772,117 + MMP_RS04070 0.71 -1.9 772,118 - MMP_RS04070 0.71 +1.0 772,127 - MMP_RS04070 0.71 -0.4 772,236 - MMP_RS04070 0.77 -0.7 772,237 + MMP_RS04070 0.77 -0.7 772,245 + MMP_RS04070 0.77 -0.7 772,264 - MMP_RS04070 0.78 -0.4 772,264 - MMP_RS04070 0.78 +1.5 772,265 + MMP_RS04070 0.78 +0.5 772,265 + MMP_RS04070 0.78 -0.8 772,265 + MMP_RS04070 0.78 -1.6 772,265 + MMP_RS04070 0.78 +0.8 772,265 + MMP_RS04070 0.78 -1.2 772,339 + MMP_RS04070 0.82 +2.6 772,341 - MMP_RS04070 0.82 -1.0 772,342 + MMP_RS04070 0.82 +0.1 772,373 + MMP_RS04070 0.84 -0.8 772,422 - MMP_RS04070 0.87 +1.5 772,423 + MMP_RS04070 0.87 -0.9 772,424 - MMP_RS04070 0.87 -0.7 772,462 - MMP_RS04070 0.89 +1.2 772,472 - MMP_RS04070 0.89 +0.7 772,539 + -0.2 773,208 - -0.7 773,251 + -0.3 773,386 + +0.9 773,630 + +0.8 773,633 - -1.2 773,633 - -0.6 773,635 - +0.4 773,636 + +1.5 773,636 + +1.0
Or see this region's nucleotide sequence