Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03690

Experiment: Formate with Bacitracin 15.6 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS03685 and MMP_RS03690 are separated by 92 nucleotidesMMP_RS03690 and MMP_RS03695 are separated by 4 nucleotides MMP_RS03685: MMP_RS03685 - Mrp/NBP35 family ATP-binding protein, at 694,408 to 695,277 _RS03685 MMP_RS03690: MMP_RS03690 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 695,370 to 696,470 _RS03690 MMP_RS03695: MMP_RS03695 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 696,475 to 697,758 _RS03695 Position (kb) 695 696 697Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 694.437 kb on - strandat 694.559 kb on + strand, within MMP_RS03685at 694.597 kb on - strand, within MMP_RS03685at 694.597 kb on - strand, within MMP_RS03685at 694.598 kb on + strand, within MMP_RS03685at 694.599 kb on - strand, within MMP_RS03685at 694.606 kb on - strand, within MMP_RS03685at 694.607 kb on + strand, within MMP_RS03685at 694.627 kb on - strand, within MMP_RS03685at 694.742 kb on + strand, within MMP_RS03685at 694.819 kb on - strand, within MMP_RS03685at 695.149 kb on - strand, within MMP_RS03685at 695.172 kb on - strand, within MMP_RS03685at 695.173 kb on + strand, within MMP_RS03685at 695.289 kb on - strandat 695.311 kb on - strandat 695.311 kb on - strandat 695.311 kb on - strandat 695.312 kb on + strandat 695.316 kb on + strandat 695.316 kb on + strandat 695.327 kb on - strandat 695.327 kb on - strandat 695.327 kb on - strandat 695.328 kb on + strandat 695.328 kb on + strandat 695.328 kb on + strandat 695.330 kb on - strandat 695.331 kb on + strandat 695.331 kb on + strandat 695.331 kb on + strandat 695.334 kb on - strandat 695.335 kb on + strandat 695.372 kb on + strandat 695.623 kb on + strandat 695.623 kb on + strandat 695.625 kb on + strandat 695.786 kb on - strandat 695.790 kb on - strandat 695.791 kb on + strandat 695.795 kb on - strandat 695.795 kb on - strandat 695.795 kb on - strandat 695.978 kb on - strandat 695.978 kb on - strandat 695.983 kb on + strandat 696.189 kb on + strandat 696.189 kb on + strandat 696.756 kb on - strandat 696.787 kb on + strandat 696.857 kb on + strandat 696.884 kb on - strandat 696.973 kb on - strandat 696.974 kb on + strandat 697.175 kb on + strandat 697.317 kb on + strandat 697.372 kb on + strandat 697.382 kb on + strandat 697.402 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Formate with Bacitracin 15.6 uM
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694,437 - +1.0
694,559 + MMP_RS03685 0.17 +0.2
694,597 - MMP_RS03685 0.22 -1.8
694,597 - MMP_RS03685 0.22 -0.8
694,598 + MMP_RS03685 0.22 -1.3
694,599 - MMP_RS03685 0.22 -1.9
694,606 - MMP_RS03685 0.23 +0.4
694,607 + MMP_RS03685 0.23 -1.1
694,627 - MMP_RS03685 0.25 -0.0
694,742 + MMP_RS03685 0.38 -0.2
694,819 - MMP_RS03685 0.47 -1.5
695,149 - MMP_RS03685 0.85 -1.9
695,172 - MMP_RS03685 0.88 -2.1
695,173 + MMP_RS03685 0.88 -0.2
695,289 - -1.0
695,311 - -1.4
695,311 - +1.2
695,311 - +0.5
695,312 + +2.1
695,316 + -0.3
695,316 + -1.6
695,327 - +0.4
695,327 - -3.1
695,327 - -1.4
695,328 + -0.6
695,328 + -0.5
695,328 + -0.6
695,330 - +0.1
695,331 + -0.7
695,331 + -2.3
695,331 + -0.6
695,334 - +0.7
695,335 + +0.7
695,372 + -1.7
695,623 + +3.7
695,623 + +0.2
695,625 + +3.3
695,786 - +1.0
695,790 - -0.5
695,791 + +1.7
695,795 - +4.3
695,795 - +3.2
695,795 - +2.2
695,978 - +1.5
695,978 - +2.7
695,983 + +3.5
696,189 + +1.2
696,189 + +2.2
696,756 - +1.6
696,787 + +1.7
696,857 + +2.3
696,884 - +1.3
696,973 - +1.2
696,974 + +1.4
697,175 + +3.2
697,317 + +1.8
697,372 + +2.7
697,382 + +0.2
697,402 - +0.2

Or see this region's nucleotide sequence