Strain Fitness in Dechlorosoma suillum PS around Dsui_3527

Experiment: ALP

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3525 and Dsui_3526 are separated by 12 nucleotidesDsui_3526 and Dsui_3527 are separated by 138 nucleotidesDsui_3527 and Dsui_3528 are separated by 29 nucleotidesDsui_3528 and Dsui_3529 are separated by 17 nucleotides Dsui_3525: Dsui_3525 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,792,002 to 3,792,766 _3525 Dsui_3526: Dsui_3526 - phosphatidylserine decarboxylase, at 3,792,779 to 3,793,423 _3526 Dsui_3527: Dsui_3527 - ketol-acid reductoisomerase, at 3,793,562 to 3,794,578 _3527 Dsui_3528: Dsui_3528 - acetolactate synthase, small subunit, at 3,794,608 to 3,795,099 _3528 Dsui_3529: Dsui_3529 - acetolactate synthase, large subunit, biosynthetic type, at 3,795,117 to 3,796,817 _3529 Position (kb) 3793 3794 3795Strain fitness (log2 ratio) -2 -1 0 1at 3793.517 kb on - strandat 3794.245 kb on - strand, within Dsui_3527at 3794.830 kb on - strand, within Dsui_3528at 3795.109 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP
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3,793,517 - -0.2
3,794,245 - Dsui_3527 0.67 -2.5
3,794,830 - Dsui_3528 0.45 -1.3
3,795,109 - -0.4

Or see this region's nucleotide sequence