Strain Fitness in Dechlorosoma suillum PS around Dsui_0891

Experiment: ALP

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0889 and Dsui_0890 are separated by 3 nucleotidesDsui_0890 and Dsui_0891 are separated by 10 nucleotidesDsui_0891 and Dsui_0892 overlap by 14 nucleotides Dsui_0889: Dsui_0889 - rod shape-determining protein MreC, at 902,775 to 903,713 _0889 Dsui_0890: Dsui_0890 - rod shape-determining protein MreD, at 903,717 to 904,238 _0890 Dsui_0891: Dsui_0891 - penicillin-binding protein 2, at 904,249 to 906,150 _0891 Dsui_0892: Dsui_0892 - rod shape-determining protein RodA, at 906,137 to 907,237 _0892 Position (kb) 904 905 906 907Strain fitness (log2 ratio) -1 0 1at 904.232 kb on + strandat 904.245 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP
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904,232 + -0.1
904,245 + -0.4

Or see this region's nucleotide sequence