Strain Fitness in Dechlorosoma suillum PS around Dsui_0757

Experiment: ALP

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0755 and Dsui_0756 are separated by 142 nucleotidesDsui_0756 and Dsui_0757 are separated by 43 nucleotidesDsui_0757 and Dsui_0758 are separated by 142 nucleotides Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103 _0755 Dsui_0756: Dsui_0756 - hypothetical protein, at 755,246 to 755,941 _0756 Dsui_0757: Dsui_0757 - HD-GYP domain-containing protein, at 755,985 to 757,190 _0757 Dsui_0758: Dsui_0758 - ATPase component of ABC transporters with duplicated ATPase domain, at 757,333 to 759,237 _0758 Position (kb) 755 756 757 758Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 755.007 kb on - strand, within Dsui_0755at 755.080 kb on + strandat 755.098 kb on + strandat 755.098 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.188 kb on + strandat 755.204 kb on + strandat 755.261 kb on - strandat 755.276 kb on + strandat 755.328 kb on + strandat 755.435 kb on - strand, within Dsui_0756at 755.450 kb on - strand, within Dsui_0756at 755.532 kb on + strand, within Dsui_0756at 755.532 kb on + strand, within Dsui_0756at 755.540 kb on - strand, within Dsui_0756at 755.540 kb on - strand, within Dsui_0756at 755.672 kb on - strand, within Dsui_0756at 755.712 kb on + strand, within Dsui_0756at 755.769 kb on - strand, within Dsui_0756at 755.796 kb on + strand, within Dsui_0756at 755.817 kb on + strandat 755.826 kb on + strand, within Dsui_0756at 755.973 kb on + strandat 755.981 kb on - strandat 756.016 kb on + strandat 756.059 kb on - strandat 756.119 kb on - strand, within Dsui_0757at 756.183 kb on + strand, within Dsui_0757at 756.251 kb on + strand, within Dsui_0757at 756.292 kb on + strandat 756.311 kb on - strand, within Dsui_0757at 756.318 kb on - strand, within Dsui_0757at 756.359 kb on - strand, within Dsui_0757at 756.384 kb on + strand, within Dsui_0757at 756.394 kb on + strand, within Dsui_0757at 756.438 kb on - strand, within Dsui_0757at 756.452 kb on + strandat 756.462 kb on + strandat 756.481 kb on - strand, within Dsui_0757at 756.509 kb on - strand, within Dsui_0757at 756.574 kb on - strand, within Dsui_0757at 756.589 kb on - strand, within Dsui_0757at 756.607 kb on + strand, within Dsui_0757at 756.626 kb on + strand, within Dsui_0757at 756.634 kb on - strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.655 kb on - strand, within Dsui_0757at 756.706 kb on + strand, within Dsui_0757at 756.706 kb on + strand, within Dsui_0757at 756.711 kb on + strand, within Dsui_0757at 756.801 kb on - strandat 756.908 kb on + strand, within Dsui_0757at 756.996 kb on + strand, within Dsui_0757at 757.007 kb on + strandat 757.007 kb on + strand, within Dsui_0757at 757.015 kb on - strand, within Dsui_0757at 757.061 kb on - strand, within Dsui_0757at 757.063 kb on - strand, within Dsui_0757at 757.070 kb on + strandat 757.083 kb on - strandat 757.137 kb on - strandat 757.198 kb on + strandat 757.198 kb on + strandat 757.206 kb on - strandat 757.211 kb on - strandat 757.215 kb on - strandat 757.217 kb on + strandat 757.330 kb on + strandat 757.420 kb on - strandat 757.517 kb on - strandat 757.603 kb on - strand, within Dsui_0758at 757.607 kb on + strand, within Dsui_0758at 757.631 kb on - strand, within Dsui_0758at 757.710 kb on + strand, within Dsui_0758at 757.736 kb on + strand, within Dsui_0758at 757.776 kb on + strand, within Dsui_0758at 757.807 kb on + strand, within Dsui_0758at 757.840 kb on - strand, within Dsui_0758at 757.876 kb on - strandat 757.973 kb on + strand, within Dsui_0758at 757.981 kb on - strand, within Dsui_0758at 757.995 kb on + strand, within Dsui_0758at 758.007 kb on + strand, within Dsui_0758at 758.007 kb on + strand, within Dsui_0758at 758.068 kb on - strand, within Dsui_0758at 758.176 kb on + strand, within Dsui_0758

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP
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755,007 - Dsui_0755 0.84 -0.6
755,080 + -0.6
755,098 + +0.4
755,098 + +0.4
755,103 + -1.2
755,103 + -0.6
755,103 + -0.6
755,103 + -0.6
755,188 + -0.6
755,204 + +0.4
755,261 - -0.3
755,276 + -2.0
755,328 + -0.6
755,435 - Dsui_0756 0.27 -1.6
755,450 - Dsui_0756 0.29 -2.3
755,532 + Dsui_0756 0.41 -1.6
755,532 + Dsui_0756 0.41 -0.6
755,540 - Dsui_0756 0.42 -2.0
755,540 - Dsui_0756 0.42 -2.2
755,672 - Dsui_0756 0.61 -1.6
755,712 + Dsui_0756 0.67 -1.2
755,769 - Dsui_0756 0.75 -1.2
755,796 + Dsui_0756 0.79 +0.4
755,817 + +0.4
755,826 + Dsui_0756 0.83 +0.4
755,973 + +0.4
755,981 - +0.1
756,016 + -1.2
756,059 - +0.5
756,119 - Dsui_0757 0.11 -0.3
756,183 + Dsui_0757 0.16 -0.6
756,251 + Dsui_0757 0.22 +0.4
756,292 + +0.4
756,311 - Dsui_0757 0.27 -0.0
756,318 - Dsui_0757 0.28 -0.4
756,359 - Dsui_0757 0.31 +0.6
756,384 + Dsui_0757 0.33 +0.4
756,394 + Dsui_0757 0.34 +0.4
756,438 - Dsui_0757 0.38 +2.0
756,452 + +0.4
756,462 + +0.4
756,481 - Dsui_0757 0.41 -0.5
756,509 - Dsui_0757 0.43 +0.4
756,574 - Dsui_0757 0.49 -0.9
756,589 - Dsui_0757 0.50 +0.2
756,607 + Dsui_0757 0.52 -1.9
756,626 + Dsui_0757 0.53 +0.4
756,634 - Dsui_0757 0.54 -1.5
756,647 + Dsui_0757 0.55 -1.0
756,647 + Dsui_0757 0.55 -1.2
756,647 + Dsui_0757 0.55 +0.4
756,655 - Dsui_0757 0.56 -0.2
756,706 + Dsui_0757 0.60 +0.4
756,706 + Dsui_0757 0.60 -0.6
756,711 + Dsui_0757 0.60 +0.4
756,801 - +0.4
756,908 + Dsui_0757 0.77 -1.6
756,996 + Dsui_0757 0.84 +0.4
757,007 + +0.4
757,007 + Dsui_0757 0.85 -2.8
757,015 - Dsui_0757 0.85 -0.5
757,061 - Dsui_0757 0.89 -0.5
757,063 - Dsui_0757 0.89 +0.4
757,070 + -0.6
757,083 - -0.3
757,137 - -0.2
757,198 + -1.6
757,198 + +0.4
757,206 - -0.2
757,211 - -0.1
757,215 - -0.3
757,217 + +0.4
757,330 + -0.7
757,420 - -0.1
757,517 - -0.6
757,603 - Dsui_0758 0.14 -0.6
757,607 + Dsui_0758 0.14 +0.1
757,631 - Dsui_0758 0.16 -3.9
757,710 + Dsui_0758 0.20 -0.4
757,736 + Dsui_0758 0.21 -0.4
757,776 + Dsui_0758 0.23 -0.6
757,807 + Dsui_0758 0.25 -0.8
757,840 - Dsui_0758 0.27 +0.4
757,876 - +0.4
757,973 + Dsui_0758 0.34 -0.2
757,981 - Dsui_0758 0.34 -0.6
757,995 + Dsui_0758 0.35 -0.3
758,007 + Dsui_0758 0.35 -0.0
758,007 + Dsui_0758 0.35 +0.3
758,068 - Dsui_0758 0.39 +0.4
758,176 + Dsui_0758 0.44 -0.2

Or see this region's nucleotide sequence