Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27845 and BWI76_RS27850 are separated by 245 nucleotides BWI76_RS27850 and BWI76_RS27855 are separated by 223 nucleotides
BWI76_RS27845: BWI76_RS27845 - multidrug transporter EmrD, at 5,774,797 to 5,775,981
_RS27845
BWI76_RS27850: BWI76_RS27850 - DNA-binding transcriptional regulator DsdC, at 5,776,227 to 5,777,156
_RS27850
BWI76_RS27855: BWI76_RS27855 - D-serine transporter DsdX, at 5,777,380 to 5,778,717
_RS27855
Position (kb) 5776
5777
5778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5775.268 kb on + strand, within BWI76_RS27845 at 5775.370 kb on + strand, within BWI76_RS27845 at 5775.378 kb on - strand, within BWI76_RS27845 at 5775.403 kb on - strand, within BWI76_RS27845 at 5775.513 kb on - strand, within BWI76_RS27845 at 5776.186 kb on - strand at 5776.308 kb on + strand at 5776.323 kb on + strand, within BWI76_RS27850 at 5776.503 kb on + strand, within BWI76_RS27850 at 5776.799 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.812 kb on - strand, within BWI76_RS27850 at 5777.023 kb on + strand, within BWI76_RS27850 at 5777.089 kb on + strand at 5777.410 kb on + strand at 5777.410 kb on + strand at 5777.418 kb on - strand at 5777.425 kb on + strand at 5777.442 kb on - strand at 5777.521 kb on - strand, within BWI76_RS27855 at 5777.666 kb on + strand, within BWI76_RS27855 at 5777.828 kb on - strand, within BWI76_RS27855 at 5777.997 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.098 kb on + strand, within BWI76_RS27855
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 5,775,268 + BWI76_RS27845 0.40 -0.0 5,775,370 + BWI76_RS27845 0.48 -0.8 5,775,378 - BWI76_RS27845 0.49 -0.3 5,775,403 - BWI76_RS27845 0.51 +0.9 5,775,513 - BWI76_RS27845 0.60 -0.4 5,776,186 - +0.2 5,776,308 + -2.2 5,776,323 + BWI76_RS27850 0.10 -1.8 5,776,503 + BWI76_RS27850 0.30 -0.4 5,776,799 + BWI76_RS27850 0.62 -0.7 5,776,804 + BWI76_RS27850 0.62 -3.5 5,776,804 + BWI76_RS27850 0.62 -0.9 5,776,812 - BWI76_RS27850 0.63 -2.0 5,777,023 + BWI76_RS27850 0.86 -1.2 5,777,089 + -1.2 5,777,410 + -1.4 5,777,410 + -1.6 5,777,418 - -1.2 5,777,425 + -0.2 5,777,442 - -1.1 5,777,521 - BWI76_RS27855 0.11 -1.7 5,777,666 + BWI76_RS27855 0.21 -1.4 5,777,828 - BWI76_RS27855 0.33 -2.1 5,777,997 + BWI76_RS27855 0.46 -1.3 5,778,075 + +3.6 5,778,075 + BWI76_RS27855 0.52 +0.3 5,778,075 + BWI76_RS27855 0.52 +0.1 5,778,075 + BWI76_RS27855 0.52 -0.6 5,778,098 + BWI76_RS27855 0.54 -0.8
Or see this region's nucleotide sequence