Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08290

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,558,528	+		MMP_RS08280	0.80	-0.3
1,558,671	-				-0.1
1,558,749	+				+1.0
1,558,796	-		MMP_RS08285	0.14	+0.1
1,558,796	-		MMP_RS08285	0.14	-0.0
1,558,797	+		MMP_RS08285	0.14	-0.2
1,558,799	+		MMP_RS08285	0.15	+0.3
1,558,799	+		MMP_RS08285	0.15	+0.4
1,558,800	-		MMP_RS08285	0.15	-0.4
1,558,801	+		MMP_RS08285	0.15	+0.3
1,558,801	+		MMP_RS08285	0.15	+0.1
1,558,801	+		MMP_RS08285	0.15	+0.6
1,558,880	+		MMP_RS08285	0.27	-1.1
1,559,014	-		MMP_RS08285	0.46	-0.5
1,559,050	+		MMP_RS08285	0.52	+0.1
1,559,163	+		MMP_RS08285	0.68	-0.0
1,559,163	+		MMP_RS08285	0.68	+0.5
1,559,189	+		MMP_RS08285	0.72	+0.1
1,559,214	-		MMP_RS08285	0.76	+0.0
1,559,447	+				+0.2
1,559,449	+				-0.0
1,559,451	+				+0.0
1,559,505	+				-0.4
1,559,532	+		MMP_RS08290	0.16	+0.2
1,559,549	+		MMP_RS08290	0.22	-0.7
1,559,558	+		MMP_RS08290	0.26	+0.0
1,559,580	-		MMP_RS08290	0.34	-0.1
1,559,695	-		MMP_RS08290	0.76	+0.1
1,559,695	-		MMP_RS08290	0.76	-1.0
1,559,697	-		MMP_RS08290	0.77	-0.1
1,559,697	-		MMP_RS08290	0.77	-0.6
1,559,697	-		MMP_RS08290	0.77	-0.3
1,559,697	-		MMP_RS08290	0.77	-0.2
1,559,698	+		MMP_RS08290	0.77	+0.3
1,559,753	+				+0.2
1,559,756	-				-0.3
1,559,796	+				-0.1
1,559,800	+				+0.3
1,560,293	+				-2.0
1,560,395	+				-0.4
1,560,481	+				-0.6
1,560,746	-				-0.9