Experiment: Formate McCas no stress control 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02695 and MMP_RS02700 are separated by 9 nucleotides MMP_RS02700 and MMP_RS02705 are separated by 5 nucleotides
MMP_RS02695: MMP_RS02695 - formylmethanofuran dehydrogenase subunit A, at 512,896 to 514,647
_RS02695
MMP_RS02700: MMP_RS02700 - formylmethanofuran dehydrogenase subunit C, at 514,657 to 515,904
_RS02700
MMP_RS02705: MMP_RS02705 - formylmethanofuran dehydrogenase subunit B, at 515,910 to 517,241
_RS02705
Position (kb) 514
515
516 Strain fitness (log2 ratio) -1
0
1 at 513.832 kb on - strand, within MMP_RS02695 at 513.891 kb on - strand, within MMP_RS02695 at 514.006 kb on - strand, within MMP_RS02695 at 514.357 kb on + strand, within MMP_RS02695 at 514.358 kb on - strand, within MMP_RS02695 at 514.358 kb on - strand, within MMP_RS02695 at 514.359 kb on + strand, within MMP_RS02695 at 514.370 kb on + strand, within MMP_RS02695 at 514.490 kb on + strand at 514.492 kb on - strand at 514.521 kb on + strand at 514.534 kb on + strand at 514.565 kb on + strand at 514.605 kb on + strand at 514.675 kb on + strand at 514.692 kb on - strand at 514.716 kb on + strand at 514.830 kb on - strand, within MMP_RS02700 at 515.227 kb on - strand, within MMP_RS02700 at 515.285 kb on - strand, within MMP_RS02700 at 515.347 kb on - strand, within MMP_RS02700 at 515.348 kb on + strand, within MMP_RS02700 at 515.533 kb on + strand, within MMP_RS02700 at 515.590 kb on - strand, within MMP_RS02700 at 515.607 kb on + strand, within MMP_RS02700 at 515.625 kb on - strand, within MMP_RS02700 at 515.783 kb on - strand at 516.023 kb on - strand at 516.023 kb on - strand at 516.113 kb on + strand, within MMP_RS02705 at 516.213 kb on + strand, within MMP_RS02705 at 516.234 kb on - strand, within MMP_RS02705 at 516.234 kb on - strand, within MMP_RS02705 at 516.234 kb on - strand, within MMP_RS02705 at 516.466 kb on - strand, within MMP_RS02705 at 516.579 kb on + strand, within MMP_RS02705 at 516.644 kb on + strand, within MMP_RS02705 at 516.763 kb on + strand, within MMP_RS02705 at 516.879 kb on + strand, within MMP_RS02705
Per-strain Table
Position Strand Gene LocusTag Fraction Formate McCas no stress control 1 remove 513,832 - MMP_RS02695 0.53 +0.0 513,891 - MMP_RS02695 0.57 +0.3 514,006 - MMP_RS02695 0.63 -0.3 514,357 + MMP_RS02695 0.83 -0.1 514,358 - MMP_RS02695 0.83 -0.1 514,358 - MMP_RS02695 0.83 +0.1 514,359 + MMP_RS02695 0.84 -0.0 514,370 + MMP_RS02695 0.84 -0.4 514,490 + +0.1 514,492 - +0.2 514,521 + -0.0 514,534 + -0.3 514,565 + +0.6 514,605 + -0.2 514,675 + -0.2 514,692 - +0.4 514,716 + -0.0 514,830 - MMP_RS02700 0.14 -0.0 515,227 - MMP_RS02700 0.46 +0.2 515,285 - MMP_RS02700 0.50 +0.5 515,347 - MMP_RS02700 0.55 -0.0 515,348 + MMP_RS02700 0.55 -0.4 515,533 + MMP_RS02700 0.70 -0.2 515,590 - MMP_RS02700 0.75 +0.2 515,607 + MMP_RS02700 0.76 -0.3 515,625 - MMP_RS02700 0.78 +0.9 515,783 - +0.0 516,023 - -0.8 516,023 - -0.4 516,113 + MMP_RS02705 0.15 +0.0 516,213 + MMP_RS02705 0.23 +0.3 516,234 - MMP_RS02705 0.24 +0.6 516,234 - MMP_RS02705 0.24 -1.1 516,234 - MMP_RS02705 0.24 -0.1 516,466 - MMP_RS02705 0.42 -0.3 516,579 + MMP_RS02705 0.50 -0.2 516,644 + MMP_RS02705 0.55 +0.3 516,763 + MMP_RS02705 0.64 -0.1 516,879 + MMP_RS02705 0.73 -0.5
Or see this region's nucleotide sequence