Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3455 and Dsui_3456 are separated by 188 nucleotides Dsui_3456 and Dsui_3457 are separated by 74 nucleotides Dsui_3457 and Dsui_3458 are separated by 308 nucleotides
Dsui_3455: Dsui_3455 - HD-GYP domain-containing protein, at 3,715,420 to 3,718,395
_3455
Dsui_3456: Dsui_3456 - hypothetical protein, at 3,718,584 to 3,718,961
_3456
Dsui_3457: Dsui_3457 - K+ transporter, at 3,719,036 to 3,720,919
_3457
Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064
_3458
Position (kb)
3719
3720
3721 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3718.144 kb on + strand at 3718.240 kb on + strand at 3718.248 kb on - strand at 3718.318 kb on + strand at 3718.319 kb on - strand at 3718.351 kb on - strand at 3718.351 kb on - strand at 3718.351 kb on - strand at 3718.433 kb on + strand at 3718.433 kb on + strand at 3718.440 kb on + strand at 3718.563 kb on - strand at 3718.718 kb on + strand, within Dsui_3456 at 3718.810 kb on + strand, within Dsui_3456 at 3718.810 kb on + strand, within Dsui_3456 at 3718.830 kb on - strand, within Dsui_3456 at 3718.867 kb on + strand, within Dsui_3456 at 3719.033 kb on + strand at 3719.052 kb on - strand at 3719.223 kb on - strand at 3719.555 kb on - strand, within Dsui_3457 at 3719.779 kb on - strand, within Dsui_3457 at 3720.235 kb on - strand, within Dsui_3457 at 3721.072 kb on + strand at 3721.173 kb on + strand at 3721.181 kb on - strand at 3721.233 kb on - strand at 3721.502 kb on - strand, within Dsui_3458 at 3721.636 kb on + strand, within Dsui_3458 at 3721.770 kb on + strand, within Dsui_3458 at 3721.827 kb on + strand, within Dsui_3458 at 3721.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 3,718,144 + -0.5 3,718,240 + -1.0 3,718,248 - +0.5 3,718,318 + -2.0 3,718,319 - -2.0 3,718,351 - -1.5 3,718,351 - -1.5 3,718,351 - -1.0 3,718,433 + +0.5 3,718,433 + -2.3 3,718,440 + -0.5 3,718,563 - +0.5 3,718,718 + Dsui_3456 0.35 -0.5 3,718,810 + Dsui_3456 0.60 -0.5 3,718,810 + Dsui_3456 0.60 -1.5 3,718,830 - Dsui_3456 0.65 -1.5 3,718,867 + Dsui_3456 0.75 -1.5 3,719,033 + +0.5 3,719,052 - -2.5 3,719,223 - -2.1 3,719,555 - Dsui_3457 0.28 -2.6 3,719,779 - Dsui_3457 0.39 -0.9 3,720,235 - Dsui_3457 0.64 -2.3 3,721,072 + +0.5 3,721,173 + -2.0 3,721,181 - -2.3 3,721,233 - -2.8 3,721,502 - Dsui_3458 0.33 -0.5 3,721,636 + Dsui_3458 0.49 -0.2 3,721,770 + Dsui_3458 0.65 -0.5 3,721,827 + Dsui_3458 0.72 -0.5 3,721,874 - +0.5
Or see this region's nucleotide sequence