Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3414 and Dsui_3415 overlap by 4 nucleotides Dsui_3415 and Dsui_3416 overlap by 8 nucleotides Dsui_3416 and Dsui_3417 are separated by 56 nucleotides
Dsui_3414: Dsui_3414 - FAD/FMN-dependent dehydrogenase, at 3,666,517 to 3,667,617
_3414
Dsui_3415: Dsui_3415 - FAD/FMN-dependent dehydrogenase, at 3,667,614 to 3,669,074
_3415
Dsui_3416: Dsui_3416 - transcriptional regulator, at 3,669,067 to 3,669,876
_3416
Dsui_3417: Dsui_3417 - hypothetical protein, at 3,669,933 to 3,670,328
_3417
Position (kb)
3667
3668
3669
3670 Strain fitness (log2 ratio)
-2
-1
0
1 at 3666.652 kb on + strand, within Dsui_3414 at 3666.727 kb on + strand, within Dsui_3414 at 3666.755 kb on - strand, within Dsui_3414 at 3666.819 kb on + strand, within Dsui_3414 at 3666.856 kb on - strand, within Dsui_3414 at 3666.922 kb on + strand, within Dsui_3414 at 3667.048 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand at 3667.069 kb on - strand, within Dsui_3414 at 3667.069 kb on - strand, within Dsui_3414 at 3667.106 kb on + strand at 3667.230 kb on - strand, within Dsui_3414 at 3667.237 kb on - strand, within Dsui_3414 at 3667.278 kb on - strand, within Dsui_3414 at 3667.378 kb on - strand, within Dsui_3414 at 3667.384 kb on - strand, within Dsui_3414 at 3667.419 kb on - strand, within Dsui_3414 at 3667.509 kb on - strand at 3667.564 kb on + strand at 3667.582 kb on - strand at 3667.679 kb on - strand at 3667.700 kb on + strand at 3667.708 kb on - strand at 3667.752 kb on - strand at 3667.752 kb on - strand at 3667.769 kb on - strand, within Dsui_3415 at 3667.820 kb on - strand, within Dsui_3415 at 3667.825 kb on - strand, within Dsui_3415 at 3667.829 kb on + strand, within Dsui_3415 at 3667.922 kb on - strand, within Dsui_3415 at 3667.934 kb on + strand, within Dsui_3415 at 3667.977 kb on + strand, within Dsui_3415 at 3668.007 kb on - strand, within Dsui_3415 at 3668.080 kb on + strand at 3668.088 kb on - strand, within Dsui_3415 at 3668.088 kb on - strand, within Dsui_3415 at 3668.137 kb on + strand, within Dsui_3415 at 3668.256 kb on - strand, within Dsui_3415 at 3668.341 kb on - strand, within Dsui_3415 at 3668.370 kb on - strand, within Dsui_3415 at 3668.385 kb on - strand, within Dsui_3415 at 3668.395 kb on - strand, within Dsui_3415 at 3668.522 kb on + strand, within Dsui_3415 at 3668.643 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.720 kb on - strand, within Dsui_3415 at 3668.743 kb on - strand, within Dsui_3415 at 3668.872 kb on - strand, within Dsui_3415 at 3668.921 kb on + strand, within Dsui_3415 at 3668.985 kb on - strand at 3669.073 kb on - strand at 3669.221 kb on + strand, within Dsui_3416 at 3669.221 kb on + strand at 3669.431 kb on + strand at 3669.516 kb on - strand, within Dsui_3416 at 3669.576 kb on + strand at 3669.673 kb on + strand at 3669.828 kb on + strand at 3669.830 kb on - strand at 3669.912 kb on - strand at 3669.960 kb on - strand at 3670.048 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 3,666,652 + Dsui_3414 0.12 -1.5 3,666,727 + Dsui_3414 0.19 -1.8 3,666,755 - Dsui_3414 0.22 +0.2 3,666,819 + Dsui_3414 0.27 +0.5 3,666,856 - Dsui_3414 0.31 +0.6 3,666,922 + Dsui_3414 0.37 +0.5 3,667,048 + Dsui_3414 0.48 -1.8 3,667,055 + Dsui_3414 0.49 +0.5 3,667,055 + -0.5 3,667,069 - Dsui_3414 0.50 +0.7 3,667,069 - Dsui_3414 0.50 +0.5 3,667,106 + +0.5 3,667,230 - Dsui_3414 0.65 +0.5 3,667,237 - Dsui_3414 0.65 +0.2 3,667,278 - Dsui_3414 0.69 +0.3 3,667,378 - Dsui_3414 0.78 +0.4 3,667,384 - Dsui_3414 0.79 +0.3 3,667,419 - Dsui_3414 0.82 +0.5 3,667,509 - +0.3 3,667,564 + +0.5 3,667,582 - +0.4 3,667,679 - +1.3 3,667,700 + -1.8 3,667,708 - +0.5 3,667,752 - +0.4 3,667,752 - +0.3 3,667,769 - Dsui_3415 0.11 +0.2 3,667,820 - Dsui_3415 0.14 +0.4 3,667,825 - Dsui_3415 0.14 +0.2 3,667,829 + Dsui_3415 0.15 +0.5 3,667,922 - Dsui_3415 0.21 +0.6 3,667,934 + Dsui_3415 0.22 -1.0 3,667,977 + Dsui_3415 0.25 -0.5 3,668,007 - Dsui_3415 0.27 +0.6 3,668,080 + +0.5 3,668,088 - Dsui_3415 0.32 +0.5 3,668,088 - Dsui_3415 0.32 +0.8 3,668,137 + Dsui_3415 0.36 -2.3 3,668,256 - Dsui_3415 0.44 +0.9 3,668,341 - Dsui_3415 0.50 +0.8 3,668,370 - Dsui_3415 0.52 +0.4 3,668,385 - Dsui_3415 0.53 +0.7 3,668,395 - Dsui_3415 0.53 +0.3 3,668,522 + Dsui_3415 0.62 -1.0 3,668,643 - Dsui_3415 0.70 +0.5 3,668,720 - Dsui_3415 0.76 +0.5 3,668,720 - Dsui_3415 0.76 -0.1 3,668,720 - Dsui_3415 0.76 +0.4 3,668,743 - Dsui_3415 0.77 +0.5 3,668,872 - Dsui_3415 0.86 +0.2 3,668,921 + Dsui_3415 0.89 -2.0 3,668,985 - +0.3 3,669,073 - +0.3 3,669,221 + Dsui_3416 0.19 -1.0 3,669,221 + -0.5 3,669,431 + -0.5 3,669,516 - Dsui_3416 0.55 +0.2 3,669,576 + +0.5 3,669,673 + -0.5 3,669,828 + +0.5 3,669,830 - +0.1 3,669,912 - +0.5 3,669,960 - -1.0 3,670,048 + +0.5
Or see this region's nucleotide sequence