Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3335 and Dsui_3336 are separated by 51 nucleotides Dsui_3336 and Dsui_3337 overlap by 4 nucleotides Dsui_3337 and Dsui_3338 overlap by 4 nucleotides
Dsui_3335: Dsui_3335 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 3,575,756 to 3,576,736
_3335
Dsui_3336: Dsui_3336 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, at 3,576,788 to 3,577,912
_3336
Dsui_3337: Dsui_3337 - hypothetical protein, at 3,577,909 to 3,578,505
_3337
Dsui_3338: Dsui_3338 - Zn-finger containing NTP pyrophosphohydrolase, at 3,578,502 to 3,578,954
_3338
Position (kb)
3576
3577
3578 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3575.905 kb on - strand, within Dsui_3335 at 3575.910 kb on - strand, within Dsui_3335 at 3575.911 kb on - strand, within Dsui_3335 at 3576.056 kb on - strand, within Dsui_3335 at 3576.056 kb on - strand, within Dsui_3335 at 3576.285 kb on - strand, within Dsui_3335 at 3576.332 kb on - strand, within Dsui_3335 at 3576.366 kb on + strand, within Dsui_3335 at 3576.366 kb on - strand, within Dsui_3335 at 3576.400 kb on + strand, within Dsui_3335 at 3576.423 kb on + strand, within Dsui_3335 at 3576.423 kb on + strand, within Dsui_3335 at 3576.423 kb on + strand, within Dsui_3335 at 3576.431 kb on - strand, within Dsui_3335 at 3576.447 kb on - strand, within Dsui_3335 at 3576.492 kb on + strand, within Dsui_3335 at 3576.659 kb on - strand at 3576.663 kb on + strand at 3576.664 kb on - strand at 3576.731 kb on + strand at 3576.739 kb on - strand at 3577.982 kb on - strand, within Dsui_3337 at 3577.995 kb on + strand, within Dsui_3337 at 3578.063 kb on + strand, within Dsui_3337 at 3578.128 kb on + strand, within Dsui_3337 at 3578.144 kb on - strand, within Dsui_3337 at 3578.144 kb on - strand, within Dsui_3337 at 3578.210 kb on - strand, within Dsui_3337 at 3578.220 kb on - strand, within Dsui_3337 at 3578.310 kb on - strand, within Dsui_3337 at 3578.404 kb on + strand, within Dsui_3337 at 3578.404 kb on + strand, within Dsui_3337 at 3578.412 kb on - strand, within Dsui_3337 at 3578.412 kb on - strand, within Dsui_3337 at 3578.530 kb on - strand at 3578.531 kb on - strand at 3578.531 kb on - strand at 3578.563 kb on - strand, within Dsui_3338 at 3578.612 kb on + strand, within Dsui_3338 at 3578.652 kb on - strand, within Dsui_3338 at 3578.753 kb on + strand, within Dsui_3338 at 3578.787 kb on - strand, within Dsui_3338 at 3578.803 kb on - strand, within Dsui_3338 at 3578.805 kb on + strand at 3578.813 kb on - strand, within Dsui_3338 at 3578.818 kb on - strand, within Dsui_3338 at 3578.837 kb on - strand, within Dsui_3338
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 3,575,905 - Dsui_3335 0.15 -1.0 3,575,910 - Dsui_3335 0.16 -1.0 3,575,911 - Dsui_3335 0.16 -1.0 3,576,056 - Dsui_3335 0.31 -1.0 3,576,056 - Dsui_3335 0.31 -0.4 3,576,285 - Dsui_3335 0.54 +0.6 3,576,332 - Dsui_3335 0.59 -0.4 3,576,366 + Dsui_3335 0.62 -1.1 3,576,366 - Dsui_3335 0.62 -2.6 3,576,400 + Dsui_3335 0.66 -1.2 3,576,423 + Dsui_3335 0.68 -0.7 3,576,423 + Dsui_3335 0.68 -1.0 3,576,423 + Dsui_3335 0.68 +0.1 3,576,431 - Dsui_3335 0.69 -1.0 3,576,447 - Dsui_3335 0.70 -2.9 3,576,492 + Dsui_3335 0.75 -1.3 3,576,659 - -1.4 3,576,663 + -0.1 3,576,664 - -0.6 3,576,731 + -1.8 3,576,739 - -0.5 3,577,982 - Dsui_3337 0.12 +0.1 3,577,995 + Dsui_3337 0.14 -0.4 3,578,063 + Dsui_3337 0.26 -0.4 3,578,128 + Dsui_3337 0.37 +0.6 3,578,144 - Dsui_3337 0.39 -0.5 3,578,144 - Dsui_3337 0.39 -0.3 3,578,210 - Dsui_3337 0.50 -0.0 3,578,220 - Dsui_3337 0.52 +0.1 3,578,310 - Dsui_3337 0.67 -0.3 3,578,404 + Dsui_3337 0.83 -0.4 3,578,404 + Dsui_3337 0.83 +0.6 3,578,412 - Dsui_3337 0.84 -0.7 3,578,412 - Dsui_3337 0.84 +0.0 3,578,530 - -0.1 3,578,531 - +0.0 3,578,531 - -0.5 3,578,563 - Dsui_3338 0.13 +0.2 3,578,612 + Dsui_3338 0.24 -0.4 3,578,652 - Dsui_3338 0.33 -0.2 3,578,753 + Dsui_3338 0.55 -0.4 3,578,787 - Dsui_3338 0.63 -0.0 3,578,803 - Dsui_3338 0.66 -0.1 3,578,805 + +0.6 3,578,813 - Dsui_3338 0.69 -0.2 3,578,818 - Dsui_3338 0.70 -0.4 3,578,837 - Dsui_3338 0.74 -0.4
Or see this region's nucleotide sequence