Strain Fitness in Dechlorosoma suillum PS around Dsui_3180
Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 2 mM |
---|---|---|---|---|---|
remove | |||||
3,410,219 | - | -1.6 | |||
3,410,232 | + | +0.4 | |||
3,410,425 | - | +0.4 | |||
3,410,485 | - | Dsui_3179 | 0.34 | -2.4 | |
3,410,504 | - | Dsui_3179 | 0.35 | -0.6 | |
3,410,590 | - | Dsui_3179 | 0.43 | -1.6 | |
3,410,703 | + | +0.4 | |||
3,410,751 | + | +0.4 | |||
3,410,759 | - | Dsui_3179 | 0.59 | -1.2 | |
3,410,999 | - | Dsui_3179 | 0.82 | -2.6 | |
3,411,132 | + | +0.4 | |||
3,411,211 | - | +0.4 | |||
3,411,268 | - | Dsui_3180 | 0.11 | -0.6 | |
3,411,419 | - | Dsui_3180 | 0.32 | +0.4 | |
3,411,490 | + | +0.4 | |||
3,411,553 | - | Dsui_3180 | 0.51 | -0.0 | |
3,411,610 | + | Dsui_3180 | 0.59 | +0.4 | |
3,411,633 | + | Dsui_3180 | 0.62 | -1.2 | |
3,411,749 | + | +0.4 | |||
3,411,773 | + | Dsui_3180 | 0.82 | -0.6 | |
3,411,781 | - | Dsui_3180 | 0.83 | -1.2 | |
3,412,035 | - | +0.4 | |||
3,412,038 | + | -0.6 | |||
3,412,045 | - | +0.4 | |||
3,412,050 | - | -1.2 | |||
3,412,163 | + | -1.2 | |||
3,412,260 | - | +0.4 | |||
3,412,324 | + | +0.4 | |||
3,412,356 | - | +0.4 | |||
3,412,406 | + | +0.4 | |||
3,412,466 | - | +0.4 | |||
3,412,550 | - | +0.4 | |||
3,412,560 | - | +0.4 | |||
3,412,570 | - | -1.6 | |||
3,412,669 | - | +0.4 | |||
3,412,825 | + | +0.4 | |||
3,412,833 | - | Dsui_3181 | 0.64 | -0.3 |
Or see this region's nucleotide sequence