Strain Fitness in Dechlorosoma suillum PS around Dsui_3157

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3156 and Dsui_3157 are separated by 187 nucleotidesDsui_3157 and Dsui_3158 are separated by 78 nucleotides Dsui_3156: Dsui_3156 - putative permease, at 3,378,540 to 3,379,313 _3156 Dsui_3157: Dsui_3157 - Fatty acid cis/trans isomerase (CTI), at 3,379,501 to 3,381,852 _3157 Dsui_3158: Dsui_3158 - Na+/H+ dicarboxylate symporter, at 3,381,931 to 3,383,277 _3158 Position (kb) 3379 3380 3381 3382Strain fitness (log2 ratio) -3 -2 -1 0 1at 3378.806 kb on - strand, within Dsui_3156at 3378.892 kb on + strand, within Dsui_3156at 3378.927 kb on - strand, within Dsui_3156at 3378.946 kb on + strand, within Dsui_3156at 3379.059 kb on + strand, within Dsui_3156at 3379.065 kb on - strand, within Dsui_3156at 3379.162 kb on + strand, within Dsui_3156at 3379.170 kb on - strandat 3379.173 kb on - strand, within Dsui_3156at 3379.186 kb on + strand, within Dsui_3156at 3379.270 kb on - strandat 3379.293 kb on + strandat 3379.395 kb on + strandat 3379.463 kb on + strandat 3379.463 kb on + strandat 3379.480 kb on + strandat 3379.480 kb on + strandat 3379.733 kb on + strandat 3379.906 kb on + strand, within Dsui_3157at 3380.159 kb on - strand, within Dsui_3157at 3380.256 kb on - strand, within Dsui_3157at 3380.261 kb on - strandat 3380.516 kb on + strand, within Dsui_3157at 3380.538 kb on - strand, within Dsui_3157at 3380.782 kb on - strandat 3380.870 kb on - strandat 3380.876 kb on + strand, within Dsui_3157at 3380.915 kb on - strand, within Dsui_3157at 3381.034 kb on + strand, within Dsui_3157at 3381.168 kb on + strand, within Dsui_3157at 3381.432 kb on + strand, within Dsui_3157at 3381.453 kb on - strandat 3381.480 kb on + strand, within Dsui_3157at 3381.583 kb on + strand, within Dsui_3157at 3381.601 kb on - strand, within Dsui_3157at 3381.678 kb on + strandat 3381.728 kb on + strandat 3381.728 kb on + strandat 3381.728 kb on + strandat 3381.728 kb on + strandat 3381.736 kb on - strandat 3381.736 kb on - strandat 3381.802 kb on + strandat 3381.834 kb on - strandat 3381.834 kb on - strandat 3381.926 kb on - strandat 3381.992 kb on + strandat 3381.993 kb on - strandat 3382.162 kb on + strand, within Dsui_3158at 3382.282 kb on - strand, within Dsui_3158at 3382.308 kb on - strand, within Dsui_3158at 3382.358 kb on - strand, within Dsui_3158at 3382.379 kb on - strand, within Dsui_3158at 3382.505 kb on - strand, within Dsui_3158at 3382.588 kb on + strand, within Dsui_3158at 3382.663 kb on - strand, within Dsui_3158at 3382.701 kb on - strand, within Dsui_3158at 3382.776 kb on + strand, within Dsui_3158at 3382.818 kb on - strand, within Dsui_3158

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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3,378,806 - Dsui_3156 0.34 -1.2
3,378,892 + Dsui_3156 0.45 -2.0
3,378,927 - Dsui_3156 0.50 -0.6
3,378,946 + Dsui_3156 0.52 +0.4
3,379,059 + Dsui_3156 0.67 -1.2
3,379,065 - Dsui_3156 0.68 -0.6
3,379,162 + Dsui_3156 0.80 +0.4
3,379,170 - +0.4
3,379,173 - Dsui_3156 0.82 -1.2
3,379,186 + Dsui_3156 0.83 -1.6
3,379,270 - +0.4
3,379,293 + -2.2
3,379,395 + -3.1
3,379,463 + -1.2
3,379,463 + +0.4
3,379,480 + -1.2
3,379,480 + -2.2
3,379,733 + -1.2
3,379,906 + Dsui_3157 0.17 +0.4
3,380,159 - Dsui_3157 0.28 +0.4
3,380,256 - Dsui_3157 0.32 +0.4
3,380,261 - +0.4
3,380,516 + Dsui_3157 0.43 -1.2
3,380,538 - Dsui_3157 0.44 -0.6
3,380,782 - +0.4
3,380,870 - +0.4
3,380,876 + Dsui_3157 0.58 -2.5
3,380,915 - Dsui_3157 0.60 +0.4
3,381,034 + Dsui_3157 0.65 -2.0
3,381,168 + Dsui_3157 0.71 -3.0
3,381,432 + Dsui_3157 0.82 +0.4
3,381,453 - +0.4
3,381,480 + Dsui_3157 0.84 +0.4
3,381,583 + Dsui_3157 0.89 -1.6
3,381,601 - Dsui_3157 0.89 +0.4
3,381,678 + -0.6
3,381,728 + -1.6
3,381,728 + -0.6
3,381,728 + +0.4
3,381,728 + -1.2
3,381,736 - -1.6
3,381,736 - -1.2
3,381,802 + -1.6
3,381,834 - +0.4
3,381,834 - -2.0
3,381,926 - -2.8
3,381,992 + -1.6
3,381,993 - -2.5
3,382,162 + Dsui_3158 0.17 -2.2
3,382,282 - Dsui_3158 0.26 -2.6
3,382,308 - Dsui_3158 0.28 +0.4
3,382,358 - Dsui_3158 0.32 -3.7
3,382,379 - Dsui_3158 0.33 -3.0
3,382,505 - Dsui_3158 0.43 -1.6
3,382,588 + Dsui_3158 0.49 +0.4
3,382,663 - Dsui_3158 0.54 -2.8
3,382,701 - Dsui_3158 0.57 -2.2
3,382,776 + Dsui_3158 0.63 +0.4
3,382,818 - Dsui_3158 0.66 -2.2

Or see this region's nucleotide sequence