Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3123 and Dsui_3124 are separated by 18 nucleotides Dsui_3124 and Dsui_3125 are separated by 155 nucleotides
Dsui_3123: Dsui_3123 - methyl-accepting chemotaxis protein, at 3,344,573 to 3,345,868
_3123
Dsui_3124: Dsui_3124 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 3,345,887 to 3,346,255
_3124
Dsui_3125: Dsui_3125 - cytochrome c, mono- and diheme variants family, at 3,346,411 to 3,348,009
_3125
Position (kb)
3345
3346
3347 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3344.945 kb on - strand, within Dsui_3123 at 3345.256 kb on - strand, within Dsui_3123 at 3345.377 kb on + strand, within Dsui_3123 at 3345.428 kb on + strand, within Dsui_3123 at 3345.459 kb on - strand, within Dsui_3123 at 3345.596 kb on - strand, within Dsui_3123 at 3345.653 kb on + strand, within Dsui_3123 at 3345.676 kb on + strand, within Dsui_3123 at 3345.700 kb on + strand, within Dsui_3123 at 3345.700 kb on + strand, within Dsui_3123 at 3345.752 kb on + strand at 3345.753 kb on + strand at 3345.775 kb on + strand at 3345.788 kb on - strand at 3345.904 kb on + strand at 3345.910 kb on + strand at 3345.959 kb on + strand, within Dsui_3124 at 3345.987 kb on + strand, within Dsui_3124 at 3345.987 kb on + strand, within Dsui_3124 at 3346.058 kb on - strand, within Dsui_3124 at 3346.354 kb on + strand at 3346.621 kb on - strand, within Dsui_3125 at 3346.813 kb on - strand, within Dsui_3125 at 3346.816 kb on + strand, within Dsui_3125 at 3346.824 kb on - strand, within Dsui_3125 at 3346.825 kb on - strand, within Dsui_3125 at 3346.832 kb on - strand, within Dsui_3125 at 3346.846 kb on + strand, within Dsui_3125 at 3346.933 kb on + strand, within Dsui_3125 at 3346.941 kb on - strand, within Dsui_3125 at 3346.941 kb on - strand, within Dsui_3125 at 3346.967 kb on + strand, within Dsui_3125 at 3346.975 kb on - strand, within Dsui_3125 at 3347.108 kb on - strand, within Dsui_3125 at 3347.120 kb on + strand, within Dsui_3125 at 3347.140 kb on - strand, within Dsui_3125 at 3347.193 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 3,344,945 - Dsui_3123 0.29 -0.6 3,345,256 - Dsui_3123 0.53 -1.2 3,345,377 + Dsui_3123 0.62 -0.3 3,345,428 + Dsui_3123 0.66 -0.3 3,345,459 - Dsui_3123 0.68 -2.0 3,345,596 - Dsui_3123 0.79 -0.6 3,345,653 + Dsui_3123 0.83 -0.3 3,345,676 + Dsui_3123 0.85 +0.3 3,345,700 + Dsui_3123 0.87 -0.2 3,345,700 + Dsui_3123 0.87 +0.3 3,345,752 + +0.0 3,345,753 + -0.2 3,345,775 + +0.2 3,345,788 - -1.6 3,345,904 + -0.6 3,345,910 + -0.4 3,345,959 + Dsui_3124 0.20 -1.9 3,345,987 + Dsui_3124 0.27 -0.8 3,345,987 + Dsui_3124 0.27 -0.4 3,346,058 - Dsui_3124 0.46 -0.6 3,346,354 + -0.6 3,346,621 - Dsui_3125 0.13 +0.4 3,346,813 - Dsui_3125 0.25 +0.4 3,346,816 + Dsui_3125 0.25 +0.4 3,346,824 - Dsui_3125 0.26 +0.4 3,346,825 - Dsui_3125 0.26 +0.4 3,346,832 - Dsui_3125 0.26 -0.2 3,346,846 + Dsui_3125 0.27 -2.8 3,346,933 + Dsui_3125 0.33 -1.2 3,346,941 - Dsui_3125 0.33 -2.2 3,346,941 - Dsui_3125 0.33 -1.6 3,346,967 + Dsui_3125 0.35 -1.9 3,346,975 - Dsui_3125 0.35 +0.4 3,347,108 - Dsui_3125 0.44 -0.6 3,347,120 + Dsui_3125 0.44 -1.9 3,347,140 - Dsui_3125 0.46 +0.4 3,347,193 + +0.4
Or see this region's nucleotide sequence