Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2880 and Dsui_2881 overlap by 4 nucleotides Dsui_2881 and Dsui_2882 are separated by 10 nucleotides Dsui_2882 and Dsui_2883 overlap by 1 nucleotides
Dsui_2880: Dsui_2880 - adenosylmethionine-8-amino-7-oxononanoate transaminase, at 3,075,737 to 3,077,080
_2880
Dsui_2881: Dsui_2881 - 8-amino-7-oxononanoate synthase, at 3,077,077 to 3,078,252
_2881
Dsui_2882: Dsui_2882 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 3,078,263 to 3,079,015
_2882
Dsui_2883: Dsui_2883 - biotin biosynthesis protein BioC, at 3,079,015 to 3,079,788
_2883
Position (kb)
3077
3078
3079 Strain fitness (log2 ratio)
-2
-1
0
1 at 3076.112 kb on + strand, within Dsui_2880 at 3076.205 kb on - strand at 3076.245 kb on - strand, within Dsui_2880 at 3076.264 kb on - strand at 3076.264 kb on - strand, within Dsui_2880 at 3076.429 kb on + strand, within Dsui_2880 at 3076.455 kb on + strand, within Dsui_2880 at 3076.620 kb on - strand at 3076.629 kb on + strand, within Dsui_2880 at 3076.641 kb on + strand, within Dsui_2880 at 3076.649 kb on - strand at 3076.810 kb on + strand, within Dsui_2880 at 3076.831 kb on + strand, within Dsui_2880 at 3076.907 kb on - strand at 3076.954 kb on - strand at 3077.009 kb on - strand at 3077.111 kb on - strand at 3077.219 kb on + strand, within Dsui_2881 at 3077.227 kb on - strand at 3077.724 kb on - strand, within Dsui_2881 at 3077.838 kb on - strand, within Dsui_2881 at 3077.869 kb on - strand, within Dsui_2881 at 3077.915 kb on + strand, within Dsui_2881 at 3078.077 kb on + strand, within Dsui_2881 at 3078.085 kb on - strand at 3078.159 kb on - strand at 3078.199 kb on - strand at 3078.228 kb on - strand at 3078.285 kb on + strand at 3078.293 kb on - strand at 3078.298 kb on - strand at 3078.408 kb on + strand, within Dsui_2882 at 3078.505 kb on + strand, within Dsui_2882 at 3078.513 kb on - strand, within Dsui_2882 at 3078.524 kb on + strand, within Dsui_2882 at 3078.586 kb on - strand at 3078.878 kb on - strand, within Dsui_2882 at 3078.879 kb on - strand at 3078.983 kb on + strand at 3079.040 kb on + strand at 3079.069 kb on - strand at 3079.100 kb on - strand, within Dsui_2883 at 3079.224 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 3,076,112 + Dsui_2880 0.28 -0.1 3,076,205 - +0.5 3,076,245 - Dsui_2880 0.38 +0.5 3,076,264 - +0.5 3,076,264 - Dsui_2880 0.39 -1.5 3,076,429 + Dsui_2880 0.51 -0.3 3,076,455 + Dsui_2880 0.53 -0.5 3,076,620 - -1.1 3,076,629 + Dsui_2880 0.66 -0.4 3,076,641 + Dsui_2880 0.67 -0.4 3,076,649 - -0.5 3,076,810 + Dsui_2880 0.80 -0.3 3,076,831 + Dsui_2880 0.81 -0.1 3,076,907 - -1.1 3,076,954 - +0.5 3,077,009 - -0.5 3,077,111 - +0.5 3,077,219 + Dsui_2881 0.12 -0.2 3,077,227 - +0.5 3,077,724 - Dsui_2881 0.55 -1.5 3,077,838 - Dsui_2881 0.65 -0.5 3,077,869 - Dsui_2881 0.67 -1.1 3,077,915 + Dsui_2881 0.71 -0.2 3,078,077 + Dsui_2881 0.85 -0.4 3,078,085 - +0.5 3,078,159 - -1.5 3,078,199 - -1.1 3,078,228 - +0.5 3,078,285 + +0.1 3,078,293 - -0.5 3,078,298 - -0.5 3,078,408 + Dsui_2882 0.19 -0.2 3,078,505 + Dsui_2882 0.32 -0.1 3,078,513 - Dsui_2882 0.33 -0.5 3,078,524 + Dsui_2882 0.35 -0.1 3,078,586 - +0.5 3,078,878 - Dsui_2882 0.82 -1.8 3,078,879 - -0.5 3,078,983 + -0.2 3,079,040 + -0.3 3,079,069 - -1.8 3,079,100 - Dsui_2883 0.11 -2.5 3,079,224 + +0.5
Or see this region's nucleotide sequence