Strain Fitness in Dechlorosoma suillum PS around Dsui_2788

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2788 and Dsui_2789 are separated by 157 nucleotides Dsui_2788: Dsui_2788 - tRNA-Val, at 2,961,459 to 2,961,533 _2788 Dsui_2789: Dsui_2789 - glutamyl-tRNA synthetase, at 2,961,691 to 2,963,082 _2789 Position (kb) 2961 2962Strain fitness (log2 ratio) -1 0 1at 2960.541 kb on + strandat 2960.583 kb on - strandat 2960.618 kb on - strandat 2960.657 kb on + strandat 2960.662 kb on - strandat 2960.674 kb on + strandat 2960.785 kb on - strandat 2960.785 kb on - strandat 2960.895 kb on - strandat 2960.895 kb on - strandat 2960.895 kb on - strandat 2960.919 kb on - strandat 2960.961 kb on - strandat 2960.961 kb on - strandat 2961.025 kb on - strandat 2961.140 kb on - strandat 2961.140 kb on - strandat 2961.237 kb on - strandat 2961.561 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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2,960,541 + -1.4
2,960,583 - -0.4
2,960,618 - +0.6
2,960,657 + +0.6
2,960,662 - +0.6
2,960,674 + -1.4
2,960,785 - +0.6
2,960,785 - +0.6
2,960,895 - -1.4
2,960,895 - -1.0
2,960,895 - -0.4
2,960,919 - +0.6
2,960,961 - +0.6
2,960,961 - +0.6
2,961,025 - -1.7
2,961,140 - -0.4
2,961,140 - +0.6
2,961,237 - +0.6
2,961,561 - +0.4

Or see this region's nucleotide sequence