Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2732 and Dsui_2733 are separated by 56 nucleotides Dsui_2733 and Dsui_2734 are separated by 137 nucleotides Dsui_2734 and Dsui_2735 are separated by 576 nucleotides
Dsui_2732: Dsui_2732 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,887,207 to 2,888,073
_2732
Dsui_2733: Dsui_2733 - bacterioferritin, at 2,888,130 to 2,888,603
_2733
Dsui_2734: Dsui_2734 - bacterioferritin-associated ferredoxin, at 2,888,741 to 2,888,947
_2734
Dsui_2735: Dsui_2735 - glycine cleavage system T protein, at 2,889,524 to 2,890,615
_2735
Position (kb)
2888
2889 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2887.131 kb on - strand at 2887.149 kb on + strand at 2887.149 kb on + strand at 2887.501 kb on - strand, within Dsui_2732 at 2887.516 kb on - strand, within Dsui_2732 at 2887.555 kb on - strand, within Dsui_2732 at 2887.572 kb on - strand at 2887.614 kb on - strand, within Dsui_2732 at 2887.677 kb on - strand, within Dsui_2732 at 2887.706 kb on - strand, within Dsui_2732 at 2887.926 kb on - strand, within Dsui_2732 at 2888.030 kb on - strand at 2888.101 kb on + strand at 2888.314 kb on - strand, within Dsui_2733 at 2888.405 kb on - strand, within Dsui_2733 at 2888.444 kb on + strand, within Dsui_2733 at 2888.698 kb on - strand at 2888.815 kb on + strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.947 kb on - strand at 2888.964 kb on - strand at 2888.964 kb on - strand at 2889.161 kb on + strand at 2889.228 kb on + strand at 2889.310 kb on + strand at 2889.312 kb on + strand at 2889.377 kb on + strand at 2889.377 kb on + strand at 2889.408 kb on + strand at 2889.421 kb on + strand at 2889.422 kb on - strand at 2889.563 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,887,131 - -0.0 2,887,149 + -1.5 2,887,149 + +0.5 2,887,501 - Dsui_2732 0.34 -0.5 2,887,516 - Dsui_2732 0.36 -0.5 2,887,555 - Dsui_2732 0.40 -1.1 2,887,572 - +2.1 2,887,614 - Dsui_2732 0.47 -2.3 2,887,677 - Dsui_2732 0.54 -0.5 2,887,706 - Dsui_2732 0.58 -1.1 2,887,926 - Dsui_2732 0.83 -1.8 2,888,030 - -0.5 2,888,101 + -0.5 2,888,314 - Dsui_2733 0.39 -0.7 2,888,405 - Dsui_2733 0.58 -0.4 2,888,444 + Dsui_2733 0.66 +0.5 2,888,698 - -0.3 2,888,815 + Dsui_2734 0.36 +0.5 2,888,856 - Dsui_2734 0.56 -0.4 2,888,856 - Dsui_2734 0.56 -0.4 2,888,947 - -0.8 2,888,964 - -0.1 2,888,964 - -0.3 2,889,161 + -1.5 2,889,228 + +0.2 2,889,310 + -0.1 2,889,312 + -0.0 2,889,377 + -0.3 2,889,377 + +0.0 2,889,408 + -0.1 2,889,421 + -0.0 2,889,422 - +0.5 2,889,563 + -0.5
Or see this region's nucleotide sequence