Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2617 and Dsui_2618 are separated by 18 nucleotides Dsui_2618 and Dsui_2619 are separated by 40 nucleotides Dsui_2619 and Dsui_2620 are separated by 4 nucleotides
Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168
_2617
Dsui_2618: Dsui_2618 - putative transcriptional regulator, at 2,771,187 to 2,771,405
_2618
Dsui_2619: Dsui_2619 - hypothetical protein, at 2,771,446 to 2,771,676
_2619
Dsui_2620: Dsui_2620 - hypothetical protein, at 2,771,681 to 2,773,621
_2620
Position (kb)
2771
2772 Strain fitness (log2 ratio)
-2
-1
0
1 at 2770.520 kb on + strand, within Dsui_2617 at 2771.592 kb on + strand, within Dsui_2619 at 2771.730 kb on + strand at 2771.730 kb on + strand at 2771.735 kb on + strand at 2771.790 kb on - strand at 2771.803 kb on + strand at 2771.906 kb on - strand, within Dsui_2620 at 2772.105 kb on - strand, within Dsui_2620 at 2772.213 kb on + strand, within Dsui_2620 at 2772.251 kb on + strand, within Dsui_2620 at 2772.341 kb on + strand, within Dsui_2620 at 2772.450 kb on - strand, within Dsui_2620 at 2772.456 kb on - strand, within Dsui_2620 at 2772.467 kb on - strand, within Dsui_2620 at 2772.542 kb on + strand, within Dsui_2620 at 2772.610 kb on - strand, within Dsui_2620 at 2772.616 kb on + strand at 2772.636 kb on + strand, within Dsui_2620 at 2772.644 kb on - strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620 at 2772.659 kb on + strand, within Dsui_2620
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,770,520 + Dsui_2617 0.28 +0.5 2,771,592 + Dsui_2619 0.63 +0.5 2,771,730 + -0.5 2,771,730 + +0.5 2,771,735 + +0.5 2,771,790 - +0.9 2,771,803 + +0.5 2,771,906 - Dsui_2620 0.12 -1.1 2,772,105 - Dsui_2620 0.22 -1.5 2,772,213 + Dsui_2620 0.27 -0.5 2,772,251 + Dsui_2620 0.29 +0.5 2,772,341 + Dsui_2620 0.34 -1.1 2,772,450 - Dsui_2620 0.40 -1.9 2,772,456 - Dsui_2620 0.40 -1.9 2,772,467 - Dsui_2620 0.40 +0.5 2,772,542 + Dsui_2620 0.44 -0.5 2,772,610 - Dsui_2620 0.48 -0.5 2,772,616 + +0.5 2,772,636 + Dsui_2620 0.49 -0.5 2,772,644 - Dsui_2620 0.50 -0.5 2,772,659 + Dsui_2620 0.50 +0.5 2,772,659 + Dsui_2620 0.50 +0.5
Or see this region's nucleotide sequence