Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2532 and Dsui_2533 are separated by 70 nucleotides Dsui_2533 and Dsui_2534 overlap by 4 nucleotides
Dsui_2532: Dsui_2532 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 2,684,058 to 2,685,083
_2532
Dsui_2533: Dsui_2533 - TRAP-type C4-dicarboxylate transport system, small permease component, at 2,685,154 to 2,685,639
_2533
Dsui_2534: Dsui_2534 - TRAP transporter, DctM subunit, at 2,685,636 to 2,686,925
_2534
Position (kb)
2685
2686 Strain fitness (log2 ratio)
-2
-1
0
1 at 2684.230 kb on - strand at 2684.273 kb on + strand, within Dsui_2532 at 2684.298 kb on - strand at 2684.404 kb on - strand, within Dsui_2532 at 2684.487 kb on + strand, within Dsui_2532 at 2684.556 kb on + strand, within Dsui_2532 at 2684.566 kb on - strand, within Dsui_2532 at 2684.680 kb on - strand, within Dsui_2532 at 2684.732 kb on + strand, within Dsui_2532 at 2684.746 kb on - strand at 2684.756 kb on - strand at 2684.765 kb on - strand, within Dsui_2532 at 2684.806 kb on - strand at 2684.868 kb on + strand, within Dsui_2532 at 2685.006 kb on + strand at 2685.047 kb on - strand at 2685.226 kb on + strand, within Dsui_2533 at 2685.234 kb on - strand, within Dsui_2533 at 2685.325 kb on + strand, within Dsui_2533 at 2685.438 kb on - strand at 2685.466 kb on + strand, within Dsui_2533 at 2685.532 kb on - strand, within Dsui_2533 at 2685.585 kb on + strand, within Dsui_2533 at 2685.636 kb on - strand at 2685.699 kb on + strand at 2685.744 kb on + strand at 2685.852 kb on + strand, within Dsui_2534 at 2685.855 kb on - strand, within Dsui_2534 at 2685.921 kb on + strand, within Dsui_2534 at 2686.119 kb on + strand, within Dsui_2534 at 2686.160 kb on - strand at 2686.205 kb on - strand at 2686.283 kb on - strand, within Dsui_2534 at 2686.468 kb on - strand, within Dsui_2534 at 2686.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,684,230 - +0.5 2,684,273 + Dsui_2532 0.21 -0.0 2,684,298 - +0.5 2,684,404 - Dsui_2532 0.34 +0.5 2,684,487 + Dsui_2532 0.42 +0.9 2,684,556 + Dsui_2532 0.49 -1.6 2,684,566 - Dsui_2532 0.50 +0.5 2,684,680 - Dsui_2532 0.61 -0.5 2,684,732 + Dsui_2532 0.66 -0.3 2,684,746 - -0.5 2,684,756 - +0.5 2,684,765 - Dsui_2532 0.69 -0.5 2,684,806 - +0.5 2,684,868 + Dsui_2532 0.79 -0.4 2,685,006 + -0.7 2,685,047 - -0.5 2,685,226 + Dsui_2533 0.15 -2.1 2,685,234 - Dsui_2533 0.16 +0.5 2,685,325 + Dsui_2533 0.35 -0.5 2,685,438 - -0.5 2,685,466 + Dsui_2533 0.64 -1.3 2,685,532 - Dsui_2533 0.78 -1.9 2,685,585 + Dsui_2533 0.89 -1.5 2,685,636 - +0.5 2,685,699 + -0.1 2,685,744 + +0.6 2,685,852 + Dsui_2534 0.17 -2.3 2,685,855 - Dsui_2534 0.17 +0.5 2,685,921 + Dsui_2534 0.22 +0.5 2,686,119 + Dsui_2534 0.37 +0.5 2,686,160 - +0.5 2,686,205 - +0.5 2,686,283 - Dsui_2534 0.50 -1.1 2,686,468 - Dsui_2534 0.64 +0.5 2,686,496 - +0.5
Or see this region's nucleotide sequence