Strain Fitness in Dechlorosoma suillum PS around Dsui_2522

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2521 and Dsui_2522 are separated by 85 nucleotidesDsui_2522 and Dsui_2523 are separated by 142 nucleotidesDsui_2523 and Dsui_2524 are separated by 49 nucleotides Dsui_2521: Dsui_2521 - cysteine synthase A, at 2,672,738 to 2,673,724 _2521 Dsui_2522: Dsui_2522 - hypothetical protein, at 2,673,810 to 2,673,932 _2522 Dsui_2523: Dsui_2523 - hypothetical protein, at 2,674,075 to 2,674,617 _2523 Dsui_2524: Dsui_2524 - putative conserved small protein, at 2,674,667 to 2,675,002 _2524 Position (kb) 2673 2674Strain fitness (log2 ratio) -2 -1 0 1at 2672.825 kb on + strandat 2672.889 kb on - strand, within Dsui_2521at 2672.902 kb on + strand, within Dsui_2521at 2672.902 kb on + strand, within Dsui_2521at 2672.988 kb on + strand, within Dsui_2521at 2673.010 kb on - strand, within Dsui_2521at 2673.033 kb on - strand, within Dsui_2521at 2673.086 kb on - strand, within Dsui_2521at 2673.102 kb on - strand, within Dsui_2521at 2673.123 kb on - strand, within Dsui_2521at 2673.165 kb on + strand, within Dsui_2521at 2673.166 kb on + strand, within Dsui_2521at 2673.209 kb on - strand, within Dsui_2521at 2673.260 kb on + strand, within Dsui_2521at 2673.268 kb on - strand, within Dsui_2521at 2673.268 kb on - strand, within Dsui_2521at 2673.375 kb on + strand, within Dsui_2521at 2673.431 kb on + strandat 2673.444 kb on - strand, within Dsui_2521at 2673.473 kb on - strand, within Dsui_2521at 2673.489 kb on + strand, within Dsui_2521at 2673.499 kb on + strand, within Dsui_2521at 2673.675 kb on + strandat 2673.675 kb on + strandat 2673.683 kb on - strandat 2673.718 kb on + strandat 2673.718 kb on + strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.726 kb on - strandat 2673.739 kb on + strandat 2673.749 kb on + strandat 2673.749 kb on + strandat 2673.749 kb on + strandat 2673.749 kb on + strandat 2673.757 kb on - strandat 2673.757 kb on - strandat 2673.757 kb on - strandat 2673.757 kb on - strandat 2673.757 kb on - strandat 2673.830 kb on - strand, within Dsui_2522at 2673.850 kb on + strand, within Dsui_2522at 2673.850 kb on + strand, within Dsui_2522at 2673.911 kb on - strand, within Dsui_2522at 2673.960 kb on + strandat 2673.986 kb on + strandat 2674.132 kb on + strand, within Dsui_2523at 2674.146 kb on + strand, within Dsui_2523at 2674.146 kb on + strand, within Dsui_2523at 2674.183 kb on + strand, within Dsui_2523at 2674.272 kb on + strand, within Dsui_2523at 2674.353 kb on + strand, within Dsui_2523at 2674.366 kb on - strand, within Dsui_2523at 2674.373 kb on + strand, within Dsui_2523at 2674.404 kb on - strand, within Dsui_2523at 2674.503 kb on + strand, within Dsui_2523

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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2,672,825 + -0.5
2,672,889 - Dsui_2521 0.15 -1.5
2,672,902 + Dsui_2521 0.17 +0.5
2,672,902 + Dsui_2521 0.17 +0.5
2,672,988 + Dsui_2521 0.25 -1.8
2,673,010 - Dsui_2521 0.28 +0.9
2,673,033 - Dsui_2521 0.30 -0.9
2,673,086 - Dsui_2521 0.35 -0.3
2,673,102 - Dsui_2521 0.37 -1.5
2,673,123 - Dsui_2521 0.39 -0.4
2,673,165 + Dsui_2521 0.43 -1.1
2,673,166 + Dsui_2521 0.43 -1.1
2,673,209 - Dsui_2521 0.48 -1.6
2,673,260 + Dsui_2521 0.53 -1.5
2,673,268 - Dsui_2521 0.54 -0.5
2,673,268 - Dsui_2521 0.54 -0.5
2,673,375 + Dsui_2521 0.65 -1.1
2,673,431 + +0.5
2,673,444 - Dsui_2521 0.72 -0.4
2,673,473 - Dsui_2521 0.74 -0.3
2,673,489 + Dsui_2521 0.76 +0.5
2,673,499 + Dsui_2521 0.77 -0.5
2,673,675 + +0.5
2,673,675 + -0.5
2,673,683 - -0.3
2,673,718 + -1.1
2,673,718 + +0.5
2,673,726 - +0.0
2,673,726 - -0.1
2,673,726 - -0.7
2,673,726 - -0.3
2,673,726 - -0.2
2,673,726 - -0.2
2,673,726 - -0.1
2,673,739 + -0.5
2,673,749 + -0.5
2,673,749 + +0.5
2,673,749 + +0.5
2,673,749 + -1.8
2,673,757 - -0.6
2,673,757 - -0.0
2,673,757 - -0.1
2,673,757 - -0.3
2,673,757 - -0.2
2,673,830 - Dsui_2522 0.16 -0.4
2,673,850 + Dsui_2522 0.33 -1.1
2,673,850 + Dsui_2522 0.33 -1.5
2,673,911 - Dsui_2522 0.82 +0.1
2,673,960 + +0.5
2,673,986 + +0.5
2,674,132 + Dsui_2523 0.10 -1.5
2,674,146 + Dsui_2523 0.13 -0.5
2,674,146 + Dsui_2523 0.13 -1.8
2,674,183 + Dsui_2523 0.20 -0.5
2,674,272 + Dsui_2523 0.36 +0.5
2,674,353 + Dsui_2523 0.51 -0.5
2,674,366 - Dsui_2523 0.54 -0.1
2,674,373 + Dsui_2523 0.55 -0.5
2,674,404 - Dsui_2523 0.61 +0.0
2,674,503 + Dsui_2523 0.79 -0.5

Or see this region's nucleotide sequence