Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2521 and Dsui_2522 are separated by 85 nucleotides Dsui_2522 and Dsui_2523 are separated by 142 nucleotides Dsui_2523 and Dsui_2524 are separated by 49 nucleotides
Dsui_2521: Dsui_2521 - cysteine synthase A, at 2,672,738 to 2,673,724
_2521
Dsui_2522: Dsui_2522 - hypothetical protein, at 2,673,810 to 2,673,932
_2522
Dsui_2523: Dsui_2523 - hypothetical protein, at 2,674,075 to 2,674,617
_2523
Dsui_2524: Dsui_2524 - putative conserved small protein, at 2,674,667 to 2,675,002
_2524
Position (kb)
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1 at 2672.825 kb on + strand at 2672.889 kb on - strand, within Dsui_2521 at 2672.902 kb on + strand, within Dsui_2521 at 2672.902 kb on + strand, within Dsui_2521 at 2672.988 kb on + strand, within Dsui_2521 at 2673.010 kb on - strand, within Dsui_2521 at 2673.033 kb on - strand, within Dsui_2521 at 2673.086 kb on - strand, within Dsui_2521 at 2673.102 kb on - strand, within Dsui_2521 at 2673.123 kb on - strand, within Dsui_2521 at 2673.165 kb on + strand, within Dsui_2521 at 2673.166 kb on + strand, within Dsui_2521 at 2673.209 kb on - strand, within Dsui_2521 at 2673.260 kb on + strand, within Dsui_2521 at 2673.268 kb on - strand, within Dsui_2521 at 2673.268 kb on - strand, within Dsui_2521 at 2673.375 kb on + strand, within Dsui_2521 at 2673.431 kb on + strand at 2673.444 kb on - strand, within Dsui_2521 at 2673.473 kb on - strand, within Dsui_2521 at 2673.489 kb on + strand, within Dsui_2521 at 2673.499 kb on + strand, within Dsui_2521 at 2673.675 kb on + strand at 2673.675 kb on + strand at 2673.683 kb on - strand at 2673.718 kb on + strand at 2673.718 kb on + strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.739 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.830 kb on - strand, within Dsui_2522 at 2673.850 kb on + strand, within Dsui_2522 at 2673.850 kb on + strand, within Dsui_2522 at 2673.911 kb on - strand, within Dsui_2522 at 2673.960 kb on + strand at 2673.986 kb on + strand at 2674.132 kb on + strand, within Dsui_2523 at 2674.146 kb on + strand, within Dsui_2523 at 2674.146 kb on + strand, within Dsui_2523 at 2674.183 kb on + strand, within Dsui_2523 at 2674.272 kb on + strand, within Dsui_2523 at 2674.353 kb on + strand, within Dsui_2523 at 2674.366 kb on - strand, within Dsui_2523 at 2674.373 kb on + strand, within Dsui_2523 at 2674.404 kb on - strand, within Dsui_2523 at 2674.503 kb on + strand, within Dsui_2523
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,672,825 + -0.5 2,672,889 - Dsui_2521 0.15 -1.5 2,672,902 + Dsui_2521 0.17 +0.5 2,672,902 + Dsui_2521 0.17 +0.5 2,672,988 + Dsui_2521 0.25 -1.8 2,673,010 - Dsui_2521 0.28 +0.9 2,673,033 - Dsui_2521 0.30 -0.9 2,673,086 - Dsui_2521 0.35 -0.3 2,673,102 - Dsui_2521 0.37 -1.5 2,673,123 - Dsui_2521 0.39 -0.4 2,673,165 + Dsui_2521 0.43 -1.1 2,673,166 + Dsui_2521 0.43 -1.1 2,673,209 - Dsui_2521 0.48 -1.6 2,673,260 + Dsui_2521 0.53 -1.5 2,673,268 - Dsui_2521 0.54 -0.5 2,673,268 - Dsui_2521 0.54 -0.5 2,673,375 + Dsui_2521 0.65 -1.1 2,673,431 + +0.5 2,673,444 - Dsui_2521 0.72 -0.4 2,673,473 - Dsui_2521 0.74 -0.3 2,673,489 + Dsui_2521 0.76 +0.5 2,673,499 + Dsui_2521 0.77 -0.5 2,673,675 + +0.5 2,673,675 + -0.5 2,673,683 - -0.3 2,673,718 + -1.1 2,673,718 + +0.5 2,673,726 - +0.0 2,673,726 - -0.1 2,673,726 - -0.7 2,673,726 - -0.3 2,673,726 - -0.2 2,673,726 - -0.2 2,673,726 - -0.1 2,673,739 + -0.5 2,673,749 + -0.5 2,673,749 + +0.5 2,673,749 + +0.5 2,673,749 + -1.8 2,673,757 - -0.6 2,673,757 - -0.0 2,673,757 - -0.1 2,673,757 - -0.3 2,673,757 - -0.2 2,673,830 - Dsui_2522 0.16 -0.4 2,673,850 + Dsui_2522 0.33 -1.1 2,673,850 + Dsui_2522 0.33 -1.5 2,673,911 - Dsui_2522 0.82 +0.1 2,673,960 + +0.5 2,673,986 + +0.5 2,674,132 + Dsui_2523 0.10 -1.5 2,674,146 + Dsui_2523 0.13 -0.5 2,674,146 + Dsui_2523 0.13 -1.8 2,674,183 + Dsui_2523 0.20 -0.5 2,674,272 + Dsui_2523 0.36 +0.5 2,674,353 + Dsui_2523 0.51 -0.5 2,674,366 - Dsui_2523 0.54 -0.1 2,674,373 + Dsui_2523 0.55 -0.5 2,674,404 - Dsui_2523 0.61 +0.0 2,674,503 + Dsui_2523 0.79 -0.5
Or see this region's nucleotide sequence