Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2460 and Dsui_2461 overlap by 4 nucleotides Dsui_2461 and Dsui_2462 are separated by 30 nucleotides Dsui_2462 and Dsui_2463 are separated by 67 nucleotides Dsui_2463 and Dsui_2464 are separated by 158 nucleotides
Dsui_2460: Dsui_2460 - ribonuclease III, at 2,618,031 to 2,618,723
_2460
Dsui_2461: Dsui_2461 - GTP-binding protein Era, at 2,618,720 to 2,619,613
_2461
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Dsui_2464: Dsui_2464 - holo-(acyl-carrier-protein) synthase, at 2,621,336 to 2,621,725
_2464
Position (kb)
2619
2620
2621 Strain fitness (log2 ratio)
-2
-1
0
1 at 2619.597 kb on + strand at 2619.634 kb on + strand at 2619.659 kb on + strand at 2619.683 kb on + strand at 2619.747 kb on + strand, within Dsui_2462 at 2619.747 kb on + strand, within Dsui_2462 at 2619.760 kb on + strand, within Dsui_2462 at 2619.818 kb on + strand, within Dsui_2462 at 2619.829 kb on + strand, within Dsui_2462 at 2619.862 kb on + strand, within Dsui_2462 at 2619.949 kb on - strand, within Dsui_2462 at 2619.987 kb on - strand, within Dsui_2462 at 2619.995 kb on + strand, within Dsui_2462 at 2620.037 kb on + strand, within Dsui_2462 at 2620.091 kb on - strand, within Dsui_2462 at 2620.116 kb on - strand, within Dsui_2462 at 2620.145 kb on - strand at 2620.248 kb on + strand, within Dsui_2462 at 2620.323 kb on - strand at 2621.187 kb on - strand at 2621.188 kb on + strand at 2621.211 kb on + strand at 2621.211 kb on + strand at 2621.246 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.267 kb on + strand at 2621.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,619,597 + -0.4 2,619,634 + -0.1 2,619,659 + -0.5 2,619,683 + -0.3 2,619,747 + Dsui_2462 0.14 -0.0 2,619,747 + Dsui_2462 0.14 -0.2 2,619,760 + Dsui_2462 0.16 -0.4 2,619,818 + Dsui_2462 0.24 -0.7 2,619,829 + Dsui_2462 0.26 -0.2 2,619,862 + Dsui_2462 0.31 -0.5 2,619,949 - Dsui_2462 0.43 -1.1 2,619,987 - Dsui_2462 0.48 +0.5 2,619,995 + Dsui_2462 0.49 +0.0 2,620,037 + Dsui_2462 0.55 -0.8 2,620,091 - Dsui_2462 0.63 -1.9 2,620,116 - Dsui_2462 0.66 +0.5 2,620,145 - +0.5 2,620,248 + Dsui_2462 0.85 -0.7 2,620,323 - +0.5 2,621,187 - +0.5 2,621,188 + -0.4 2,621,211 + -0.6 2,621,211 + -0.2 2,621,246 + -0.4 2,621,258 + -0.4 2,621,258 + -0.6 2,621,258 + -0.3 2,621,258 + +0.3 2,621,258 + -0.6 2,621,266 - -0.5 2,621,266 - -2.5 2,621,266 - +0.5 2,621,267 + -0.5 2,621,316 - +0.5
Or see this region's nucleotide sequence