Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2307 and Dsui_2308 are separated by 16 nucleotides Dsui_2308 and Dsui_2309 overlap by 14 nucleotides Dsui_2309 and Dsui_2310 are separated by 37 nucleotides
Dsui_2307: Dsui_2307 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,463,555 to 2,464,214
_2307
Dsui_2308: Dsui_2308 - lysophospholipase L1-like esterase, at 2,464,231 to 2,464,854
_2308
Dsui_2309: Dsui_2309 - selenium donor protein, at 2,464,841 to 2,465,887
_2309
Dsui_2310: Dsui_2310 - tRNA 2-selenouridine synthase, at 2,465,925 to 2,467,013
_2310
Position (kb)
2464
2465
2466 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2463.898 kb on - strand, within Dsui_2307 at 2464.052 kb on + strand at 2464.060 kb on - strand, within Dsui_2307 at 2464.130 kb on + strand, within Dsui_2307 at 2464.132 kb on - strand, within Dsui_2307 at 2464.169 kb on - strand at 2464.189 kb on + strand at 2464.189 kb on + strand at 2464.194 kb on + strand at 2464.197 kb on - strand at 2464.197 kb on - strand at 2464.202 kb on - strand at 2464.231 kb on - strand at 2464.302 kb on + strand, within Dsui_2308 at 2464.304 kb on - strand, within Dsui_2308 at 2464.315 kb on - strand, within Dsui_2308 at 2464.467 kb on - strand, within Dsui_2308 at 2464.579 kb on + strand, within Dsui_2308 at 2464.584 kb on + strand, within Dsui_2308 at 2464.616 kb on - strand, within Dsui_2308 at 2464.616 kb on - strand, within Dsui_2308 at 2464.709 kb on - strand, within Dsui_2308 at 2464.766 kb on - strand, within Dsui_2308 at 2464.787 kb on - strand, within Dsui_2308 at 2464.834 kb on + strand at 2464.970 kb on - strand, within Dsui_2309 at 2465.003 kb on - strand, within Dsui_2309 at 2465.167 kb on - strand, within Dsui_2309 at 2465.327 kb on - strand, within Dsui_2309 at 2465.331 kb on - strand, within Dsui_2309 at 2465.358 kb on + strand, within Dsui_2309 at 2465.366 kb on - strand, within Dsui_2309 at 2465.394 kb on - strand, within Dsui_2309 at 2465.437 kb on - strand, within Dsui_2309 at 2465.466 kb on + strand, within Dsui_2309 at 2465.726 kb on - strand, within Dsui_2309 at 2465.807 kb on + strand at 2465.913 kb on - strand at 2466.148 kb on - strand at 2466.156 kb on + strand, within Dsui_2310 at 2466.166 kb on + strand, within Dsui_2310 at 2466.319 kb on + strand, within Dsui_2310 at 2466.343 kb on + strand, within Dsui_2310 at 2466.389 kb on + strand, within Dsui_2310 at 2466.528 kb on + strand, within Dsui_2310 at 2466.647 kb on + strand, within Dsui_2310 at 2466.673 kb on + strand, within Dsui_2310 at 2466.827 kb on - strand, within Dsui_2310 at 2466.852 kb on + strand, within Dsui_2310
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,463,898 - Dsui_2307 0.52 -0.6 2,464,052 + +0.6 2,464,060 - Dsui_2307 0.77 +0.2 2,464,130 + Dsui_2307 0.87 -1.0 2,464,132 - Dsui_2307 0.87 +0.6 2,464,169 - -0.8 2,464,189 + +1.6 2,464,189 + +0.6 2,464,194 + -1.6 2,464,197 - -2.3 2,464,197 - -1.0 2,464,202 - -2.2 2,464,231 - -1.3 2,464,302 + Dsui_2308 0.11 -0.3 2,464,304 - Dsui_2308 0.12 -1.2 2,464,315 - Dsui_2308 0.13 -0.4 2,464,467 - Dsui_2308 0.38 +0.6 2,464,579 + Dsui_2308 0.56 -1.1 2,464,584 + Dsui_2308 0.57 -0.4 2,464,616 - Dsui_2308 0.62 -2.0 2,464,616 - Dsui_2308 0.62 +0.6 2,464,709 - Dsui_2308 0.77 -1.0 2,464,766 - Dsui_2308 0.86 -1.0 2,464,787 - Dsui_2308 0.89 -0.7 2,464,834 + -2.1 2,464,970 - Dsui_2309 0.12 -0.8 2,465,003 - Dsui_2309 0.15 -1.5 2,465,167 - Dsui_2309 0.31 -1.3 2,465,327 - Dsui_2309 0.46 -0.3 2,465,331 - Dsui_2309 0.47 -1.5 2,465,358 + Dsui_2309 0.49 -1.0 2,465,366 - Dsui_2309 0.50 -0.1 2,465,394 - Dsui_2309 0.53 -1.0 2,465,437 - Dsui_2309 0.57 -2.3 2,465,466 + Dsui_2309 0.60 +0.6 2,465,726 - Dsui_2309 0.85 -1.0 2,465,807 + -1.7 2,465,913 - -1.0 2,466,148 - -0.4 2,466,156 + Dsui_2310 0.21 -2.2 2,466,166 + Dsui_2310 0.22 -0.4 2,466,319 + Dsui_2310 0.36 -1.0 2,466,343 + Dsui_2310 0.38 -3.9 2,466,389 + Dsui_2310 0.43 -3.3 2,466,528 + Dsui_2310 0.55 -2.4 2,466,647 + Dsui_2310 0.66 -1.8 2,466,673 + Dsui_2310 0.69 +0.6 2,466,827 - Dsui_2310 0.83 -0.4 2,466,852 + Dsui_2310 0.85 +0.6
Or see this region's nucleotide sequence