Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2177 and Dsui_2178 are separated by 67 nucleotides Dsui_2178 and Dsui_2179 are separated by 34 nucleotides Dsui_2179 and Dsui_2180 are separated by 78 nucleotides Dsui_2180 and Dsui_2181 are separated by 125 nucleotides
Dsui_2177: Dsui_2177 - methyltransferase family protein, at 2,313,632 to 2,314,270
_2177
Dsui_2178: Dsui_2178 - hypothetical protein, at 2,314,338 to 2,315,144
_2178
Dsui_2179: Dsui_2179 - conserved protein of DIM6/NTAB family, at 2,315,179 to 2,315,745
_2179
Dsui_2180: Dsui_2180 - hypothetical protein, at 2,315,824 to 2,316,072
_2180
Dsui_2181: Dsui_2181 - DNA-binding domain-containing protein, AraC-type, at 2,316,198 to 2,316,983
_2181
Position (kb)
2315
2316 Strain fitness (log2 ratio)
-2
-1
0
1 at 2314.243 kb on - strand at 2314.371 kb on + strand at 2314.429 kb on + strand, within Dsui_2178 at 2314.523 kb on - strand, within Dsui_2178 at 2314.561 kb on + strand, within Dsui_2178 at 2314.583 kb on + strand, within Dsui_2178 at 2314.826 kb on + strand, within Dsui_2178 at 2314.852 kb on + strand at 2314.857 kb on - strand at 2315.096 kb on + strand at 2315.214 kb on - strand at 2315.254 kb on + strand, within Dsui_2179 at 2315.313 kb on + strand, within Dsui_2179 at 2315.377 kb on - strand at 2315.404 kb on + strand, within Dsui_2179 at 2315.411 kb on - strand at 2315.412 kb on - strand, within Dsui_2179 at 2315.498 kb on + strand, within Dsui_2179 at 2315.570 kb on + strand at 2315.706 kb on + strand at 2315.734 kb on - strand at 2315.931 kb on + strand at 2316.023 kb on - strand, within Dsui_2180 at 2316.036 kb on + strand at 2316.043 kb on + strand, within Dsui_2180 at 2316.075 kb on - strand at 2316.168 kb on + strand at 2316.278 kb on - strand, within Dsui_2181 at 2316.475 kb on - strand, within Dsui_2181 at 2316.486 kb on - strand, within Dsui_2181 at 2316.535 kb on + strand at 2316.580 kb on - strand, within Dsui_2181 at 2316.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,314,243 - -0.8 2,314,371 + -1.8 2,314,429 + Dsui_2178 0.11 -0.8 2,314,523 - Dsui_2178 0.23 -0.8 2,314,561 + Dsui_2178 0.28 -1.8 2,314,583 + Dsui_2178 0.30 -0.8 2,314,826 + Dsui_2178 0.60 +0.6 2,314,852 + +0.8 2,314,857 - -0.8 2,315,096 + -0.2 2,315,214 - -1.5 2,315,254 + Dsui_2179 0.13 -1.8 2,315,313 + Dsui_2179 0.24 -1.3 2,315,377 - +0.8 2,315,404 + Dsui_2179 0.40 +0.1 2,315,411 - +0.8 2,315,412 - Dsui_2179 0.41 -1.5 2,315,498 + Dsui_2179 0.56 -1.2 2,315,570 + -0.2 2,315,706 + -1.5 2,315,734 - -0.4 2,315,931 + +0.8 2,316,023 - Dsui_2180 0.80 +0.1 2,316,036 + +0.8 2,316,043 + Dsui_2180 0.88 +0.8 2,316,075 - +0.3 2,316,168 + +0.8 2,316,278 - Dsui_2181 0.10 +0.8 2,316,475 - Dsui_2181 0.35 -1.2 2,316,486 - Dsui_2181 0.37 -0.5 2,316,535 + +0.8 2,316,580 - Dsui_2181 0.49 -1.9 2,316,742 + -0.2
Or see this region's nucleotide sequence