Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2161 and Dsui_2162 are separated by 133 nucleotides Dsui_2162 and Dsui_2163 are separated by 282 nucleotides Dsui_2163 and Dsui_2164 are separated by 146 nucleotides
Dsui_2161: Dsui_2161 - ATP-dependent chaperone ClpB, at 2,294,780 to 2,297,365
_2161
Dsui_2162: Dsui_2162 - hypothetical protein, at 2,297,499 to 2,298,074
_2162
Dsui_2163: Dsui_2163 - putative Fe-S oxidoreductase, at 2,298,357 to 2,298,773
_2163
Dsui_2164: Dsui_2164 - signal transduction histidine kinase, at 2,298,920 to 2,300,968
_2164
Position (kb)
2297
2298
2299 Strain fitness (log2 ratio)
-2
-1
0
1 at 2296.514 kb on + strand, within Dsui_2161 at 2296.630 kb on + strand, within Dsui_2161 at 2296.723 kb on + strand, within Dsui_2161 at 2296.736 kb on + strand, within Dsui_2161 at 2296.782 kb on - strand, within Dsui_2161 at 2296.811 kb on - strand at 2296.853 kb on - strand, within Dsui_2161 at 2296.853 kb on - strand, within Dsui_2161 at 2296.873 kb on - strand, within Dsui_2161 at 2296.897 kb on + strand at 2296.938 kb on + strand, within Dsui_2161 at 2296.946 kb on - strand, within Dsui_2161 at 2296.991 kb on - strand, within Dsui_2161 at 2297.018 kb on + strand, within Dsui_2161 at 2297.077 kb on - strand, within Dsui_2161 at 2297.149 kb on + strand at 2297.213 kb on - strand at 2297.354 kb on + strand at 2297.359 kb on + strand at 2297.411 kb on - strand at 2297.417 kb on - strand at 2297.440 kb on + strand at 2297.538 kb on - strand at 2297.553 kb on + strand at 2297.617 kb on + strand, within Dsui_2162 at 2297.622 kb on + strand, within Dsui_2162 at 2297.622 kb on + strand, within Dsui_2162 at 2297.628 kb on + strand, within Dsui_2162 at 2297.641 kb on - strand, within Dsui_2162 at 2297.712 kb on + strand, within Dsui_2162 at 2297.712 kb on + strand, within Dsui_2162 at 2297.777 kb on - strand, within Dsui_2162 at 2297.777 kb on - strand, within Dsui_2162 at 2297.839 kb on - strand, within Dsui_2162 at 2297.902 kb on + strand, within Dsui_2162 at 2297.902 kb on + strand, within Dsui_2162 at 2297.910 kb on - strand, within Dsui_2162 at 2297.910 kb on - strand, within Dsui_2162 at 2297.975 kb on - strand at 2298.093 kb on + strand at 2298.144 kb on + strand at 2298.144 kb on + strand at 2298.147 kb on - strand at 2298.147 kb on - strand at 2298.151 kb on + strand at 2298.206 kb on + strand at 2298.342 kb on + strand at 2298.360 kb on + strand at 2298.488 kb on - strand, within Dsui_2163 at 2298.494 kb on + strand, within Dsui_2163 at 2298.524 kb on - strand at 2298.716 kb on + strand, within Dsui_2163 at 2298.771 kb on - strand at 2298.819 kb on - strand at 2298.964 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,296,514 + Dsui_2161 0.67 +0.7 2,296,630 + Dsui_2161 0.72 -0.5 2,296,723 + Dsui_2161 0.75 -0.3 2,296,736 + Dsui_2161 0.76 -0.4 2,296,782 - Dsui_2161 0.77 +0.8 2,296,811 - +0.8 2,296,853 - Dsui_2161 0.80 +0.8 2,296,853 - Dsui_2161 0.80 -0.2 2,296,873 - Dsui_2161 0.81 +0.8 2,296,897 + +0.8 2,296,938 + Dsui_2161 0.83 -0.1 2,296,946 - Dsui_2161 0.84 -0.8 2,296,991 - Dsui_2161 0.85 +0.8 2,297,018 + Dsui_2161 0.87 -0.4 2,297,077 - Dsui_2161 0.89 -0.2 2,297,149 + -0.9 2,297,213 - +0.8 2,297,354 + -0.4 2,297,359 + -0.7 2,297,411 - -2.0 2,297,417 - +0.8 2,297,440 + +0.8 2,297,538 - +0.8 2,297,553 + -0.8 2,297,617 + Dsui_2162 0.20 -0.2 2,297,622 + Dsui_2162 0.21 -1.6 2,297,622 + Dsui_2162 0.21 +0.8 2,297,628 + Dsui_2162 0.22 +0.8 2,297,641 - Dsui_2162 0.25 -0.8 2,297,712 + Dsui_2162 0.37 +0.8 2,297,712 + Dsui_2162 0.37 +0.8 2,297,777 - Dsui_2162 0.48 -0.2 2,297,777 - Dsui_2162 0.48 +0.8 2,297,839 - Dsui_2162 0.59 -1.8 2,297,902 + Dsui_2162 0.70 +0.8 2,297,902 + Dsui_2162 0.70 +0.8 2,297,910 - Dsui_2162 0.71 +0.8 2,297,910 - Dsui_2162 0.71 +0.8 2,297,975 - +0.8 2,298,093 + +0.8 2,298,144 + +0.8 2,298,144 + -0.2 2,298,147 - -1.8 2,298,147 - +0.8 2,298,151 + +0.8 2,298,206 + +0.8 2,298,342 + +0.8 2,298,360 + -0.2 2,298,488 - Dsui_2163 0.31 -0.2 2,298,494 + Dsui_2163 0.33 -0.8 2,298,524 - -0.8 2,298,716 + Dsui_2163 0.86 +0.8 2,298,771 - +0.8 2,298,819 - +0.8 2,298,964 + -1.2
Or see this region's nucleotide sequence