Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2130 and Dsui_2131 are separated by 352 nucleotides Dsui_2131 and Dsui_2132 are separated by 150 nucleotides Dsui_2132 and Dsui_2133 are separated by 105 nucleotides Dsui_2133 and Dsui_2134 are separated by 82 nucleotides
Dsui_2130: Dsui_2130 - outer membrane receptor for ferrienterochelin and colicins, at 2,260,464 to 2,262,713
_2130
Dsui_2131: Dsui_2131 - tRNA-Arg, at 2,263,066 to 2,263,142
_2131
Dsui_2132: Dsui_2132 - tRNA-Arg, at 2,263,293 to 2,263,369
_2132
Dsui_2133: Dsui_2133 - tRNA-Ser, at 2,263,475 to 2,263,568
_2133
Dsui_2134: Dsui_2134 - aspartate kinase, monofunctional class, at 2,263,651 to 2,264,874
_2134
Position (kb)
2263
2264 Strain fitness (log2 ratio)
-2
-1
0
1 at 2262.125 kb on - strand, within Dsui_2130 at 2262.190 kb on - strand, within Dsui_2130 at 2262.292 kb on + strand, within Dsui_2130 at 2262.352 kb on - strand, within Dsui_2130 at 2262.371 kb on - strand, within Dsui_2130 at 2262.483 kb on + strand, within Dsui_2130 at 2262.516 kb on + strand at 2262.524 kb on - strand at 2262.633 kb on + strand at 2262.670 kb on - strand at 2262.681 kb on + strand at 2262.822 kb on + strand at 2262.829 kb on + strand at 2262.891 kb on + strand at 2263.128 kb on - strand, within Dsui_2131 at 2263.130 kb on - strand, within Dsui_2131 at 2263.190 kb on - strand at 2263.610 kb on - strand at 2263.611 kb on - strand at 2263.649 kb on + strand at 2263.649 kb on + strand at 2263.657 kb on - strand at 2263.657 kb on - strand at 2263.657 kb on - strand at 2263.660 kb on + strand at 2263.662 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,262,125 - Dsui_2130 0.74 -2.4 2,262,190 - Dsui_2130 0.77 -0.2 2,262,292 + Dsui_2130 0.81 -1.2 2,262,352 - Dsui_2130 0.84 -0.2 2,262,371 - Dsui_2130 0.85 -2.0 2,262,483 + Dsui_2130 0.90 +0.8 2,262,516 + -1.2 2,262,524 - -1.6 2,262,633 + -0.8 2,262,670 - -1.6 2,262,681 + +0.8 2,262,822 + +0.8 2,262,829 + +0.8 2,262,891 + -1.8 2,263,128 - Dsui_2131 0.81 +0.4 2,263,130 - Dsui_2131 0.83 +0.4 2,263,190 - -0.5 2,263,610 - +0.1 2,263,611 - -0.5 2,263,649 + -0.8 2,263,649 + -0.2 2,263,657 - +0.3 2,263,657 - +0.2 2,263,657 - +0.3 2,263,660 + -2.2 2,263,662 - -1.0
Or see this region's nucleotide sequence