Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2113 and Dsui_2114 are separated by 2 nucleotides Dsui_2114 and Dsui_2115 are separated by 280 nucleotides Dsui_2115 and Dsui_2116 are separated by 139 nucleotides
Dsui_2113: Dsui_2113 - serine acetyltransferase, at 2,238,693 to 2,239,691
_2113
Dsui_2114: Dsui_2114 - Rhodanese-related sulfurtransferase, at 2,239,694 to 2,240,236
_2114
Dsui_2115: Dsui_2115 - transcriptional regulator, at 2,240,517 to 2,241,470
_2115
Dsui_2116: Dsui_2116 - Fe-dependent oxidoreductase, alcohol dehydrogenase, at 2,241,610 to 2,242,758
_2116
Position (kb)
2240
2241
2242 Strain fitness (log2 ratio)
-2
-1
0
1 at 2239.692 kb on + strand at 2240.165 kb on + strand, within Dsui_2114 at 2240.173 kb on - strand at 2240.309 kb on - strand at 2240.491 kb on - strand at 2240.770 kb on + strand, within Dsui_2115 at 2240.817 kb on - strand, within Dsui_2115 at 2240.829 kb on - strand, within Dsui_2115 at 2240.963 kb on - strand, within Dsui_2115 at 2240.963 kb on - strand, within Dsui_2115 at 2241.200 kb on - strand, within Dsui_2115 at 2241.248 kb on + strand, within Dsui_2115 at 2241.404 kb on + strand at 2241.582 kb on + strand at 2241.592 kb on + strand at 2241.627 kb on + strand at 2241.635 kb on - strand at 2241.635 kb on - strand at 2241.761 kb on - strand at 2241.763 kb on + strand, within Dsui_2116 at 2241.794 kb on - strand at 2241.884 kb on - strand, within Dsui_2116 at 2241.884 kb on - strand, within Dsui_2116 at 2241.905 kb on + strand at 2242.053 kb on + strand at 2242.133 kb on - strand, within Dsui_2116 at 2242.330 kb on + strand, within Dsui_2116 at 2242.377 kb on + strand, within Dsui_2116 at 2242.406 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 2,239,692 + +0.8 2,240,165 + Dsui_2114 0.87 -0.8 2,240,173 - +0.8 2,240,309 - +0.8 2,240,491 - -0.8 2,240,770 + Dsui_2115 0.27 +0.8 2,240,817 - Dsui_2115 0.31 +0.2 2,240,829 - Dsui_2115 0.33 +0.8 2,240,963 - Dsui_2115 0.47 -1.2 2,240,963 - Dsui_2115 0.47 +0.8 2,241,200 - Dsui_2115 0.72 +0.8 2,241,248 + Dsui_2115 0.77 -0.8 2,241,404 + -0.8 2,241,582 + +0.8 2,241,592 + -0.2 2,241,627 + -0.2 2,241,635 - +0.8 2,241,635 - -0.2 2,241,761 - +0.8 2,241,763 + Dsui_2116 0.13 +0.8 2,241,794 - +0.8 2,241,884 - Dsui_2116 0.24 -1.8 2,241,884 - Dsui_2116 0.24 -1.2 2,241,905 + -1.2 2,242,053 + -0.8 2,242,133 - Dsui_2116 0.46 -0.8 2,242,330 + Dsui_2116 0.63 -0.2 2,242,377 + Dsui_2116 0.67 +0.8 2,242,406 + +0.8
Or see this region's nucleotide sequence