Strain Fitness in Dechlorosoma suillum PS around Dsui_1888
Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 2 mM |
---|---|---|---|---|---|
remove | |||||
1,986,915 | - | Dsui_1887 | 0.56 | -1.9 | |
1,986,916 | - | Dsui_1887 | 0.56 | +0.7 | |
1,987,076 | + | +0.7 | |||
1,987,144 | - | Dsui_1887 | 0.66 | +0.7 | |
1,987,395 | + | Dsui_1887 | 0.77 | +0.7 | |
1,987,405 | + | Dsui_1887 | 0.78 | -1.9 | |
1,987,428 | + | +0.7 | |||
1,987,592 | - | +0.7 | |||
1,987,656 | - | Dsui_1887 | 0.89 | -0.9 | |
1,987,678 | + | -0.3 | |||
1,987,689 | + | -2.3 | |||
1,987,810 | + | +0.7 | |||
1,987,838 | - | -0.9 | |||
1,987,902 | - | +0.7 | |||
1,987,935 | - | +0.7 | |||
1,988,129 | - | Dsui_1888 | 0.29 | -0.9 | |
1,988,160 | + | +0.7 | |||
1,988,177 | + | +0.7 | |||
1,988,184 | - | Dsui_1888 | 0.35 | -1.9 | |
1,988,438 | + | Dsui_1888 | 0.65 | -0.9 | |
1,988,440 | - | Dsui_1888 | 0.65 | -0.9 | |
1,988,776 | + | +0.7 | |||
1,988,794 | - | Dsui_1889 | 0.15 | -0.9 | |
1,989,230 | + | +0.7 | |||
1,989,245 | - | -0.9 | |||
1,989,365 | + | Dsui_1890 | 0.12 | +0.7 | |
1,989,395 | - | Dsui_1890 | 0.13 | +0.4 | |
1,989,532 | + | Dsui_1890 | 0.18 | -1.3 | |
1,989,661 | + | Dsui_1890 | 0.23 | -1.3 |
Or see this region's nucleotide sequence