Strain Fitness in Dechlorosoma suillum PS around Dsui_1798
Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Zinc 2 mM |
---|---|---|---|---|---|
remove | |||||
1,896,336 | - | Dsui_1796 | 0.71 | -0.5 | |
1,896,404 | + | Dsui_1796 | 0.78 | -1.8 | |
1,896,422 | - | Dsui_1796 | 0.80 | +0.5 | |
1,896,423 | + | +0.5 | |||
1,896,484 | - | +0.5 | |||
1,896,484 | - | Dsui_1796 | 0.86 | -0.5 | |
1,896,587 | - | +0.5 | |||
1,896,594 | + | -0.5 | |||
1,896,600 | - | +0.5 | |||
1,896,657 | - | +0.5 | |||
1,896,669 | + | -0.5 | |||
1,896,714 | - | -1.1 | |||
1,896,722 | + | -1.5 | |||
1,896,736 | - | -0.5 | |||
1,896,774 | - | Dsui_1797 | 0.14 | -0.5 | |
1,896,801 | + | +0.5 | |||
1,896,825 | - | +0.5 | |||
1,896,834 | + | +0.5 | |||
1,896,842 | - | Dsui_1797 | 0.26 | +0.5 | |
1,896,898 | + | Dsui_1797 | 0.36 | +0.5 | |
1,896,906 | - | Dsui_1797 | 0.37 | -0.5 | |
1,896,937 | + | +0.5 | |||
1,896,947 | - | Dsui_1797 | 0.45 | +0.5 | |
1,896,948 | + | Dsui_1797 | 0.45 | -2.1 | |
1,896,983 | - | Dsui_1797 | 0.51 | +0.5 | |
1,897,014 | - | Dsui_1797 | 0.56 | -0.5 | |
1,897,042 | + | +0.5 | |||
1,897,050 | - | Dsui_1797 | 0.62 | -0.5 | |
1,897,099 | - | Dsui_1797 | 0.71 | -1.8 | |
1,897,136 | - | Dsui_1797 | 0.77 | +0.5 | |
1,897,233 | + | -1.1 | |||
1,897,241 | - | -1.1 | |||
1,897,266 | - | -0.5 |
Or see this region's nucleotide sequence