Strain Fitness in Dechlorosoma suillum PS around Dsui_1490

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1489 and Dsui_1490 are separated by 227 nucleotidesDsui_1490 and Dsui_1491 are separated by 32 nucleotidesDsui_1491 and Dsui_1492 are separated by 95 nucleotides Dsui_1489: Dsui_1489 - hypothetical protein, at 1,551,031 to 1,552,383 _1489 Dsui_1490: Dsui_1490 - DNA-binding protein, excisionase family, at 1,552,611 to 1,552,883 _1490 Dsui_1491: Dsui_1491 - molecular chaperone (small heat shock protein), at 1,552,916 to 1,553,485 _1491 Dsui_1492: Dsui_1492 - ATPase with chaperone activity, ATP-binding subunit, at 1,553,581 to 1,556,430 _1492 Position (kb) 1552 1553Strain fitness (log2 ratio) -3 -2 -1 0 1at 1551.660 kb on + strand, within Dsui_1489at 1551.660 kb on + strand, within Dsui_1489at 1551.698 kb on + strand, within Dsui_1489at 1551.799 kb on - strand, within Dsui_1489at 1551.809 kb on - strand, within Dsui_1489at 1551.809 kb on - strand, within Dsui_1489at 1551.934 kb on + strand, within Dsui_1489at 1551.949 kb on + strand, within Dsui_1489at 1552.041 kb on + strand, within Dsui_1489at 1552.044 kb on - strand, within Dsui_1489at 1552.215 kb on - strand, within Dsui_1489at 1552.255 kb on - strandat 1552.264 kb on + strandat 1552.272 kb on - strandat 1552.411 kb on + strandat 1552.693 kb on - strand, within Dsui_1490at 1552.703 kb on - strand, within Dsui_1490at 1552.781 kb on + strand, within Dsui_1490at 1552.791 kb on + strand, within Dsui_1490at 1552.803 kb on - strand, within Dsui_1490at 1552.971 kb on + strandat 1552.973 kb on + strand, within Dsui_1491at 1552.979 kb on - strand, within Dsui_1491at 1552.997 kb on - strand, within Dsui_1491at 1553.048 kb on - strand, within Dsui_1491at 1553.191 kb on - strand, within Dsui_1491at 1553.209 kb on + strand, within Dsui_1491at 1553.252 kb on + strand, within Dsui_1491at 1553.309 kb on + strand, within Dsui_1491at 1553.351 kb on + strand, within Dsui_1491at 1553.394 kb on - strand, within Dsui_1491at 1553.404 kb on - strand, within Dsui_1491at 1553.418 kb on + strand, within Dsui_1491at 1553.530 kb on - strandat 1553.540 kb on - strandat 1553.655 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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1,551,660 + Dsui_1489 0.46 +0.5
1,551,660 + Dsui_1489 0.46 +0.5
1,551,698 + Dsui_1489 0.49 -0.5
1,551,799 - Dsui_1489 0.57 +0.5
1,551,809 - Dsui_1489 0.58 +0.5
1,551,809 - Dsui_1489 0.58 -0.5
1,551,934 + Dsui_1489 0.67 -1.1
1,551,949 + Dsui_1489 0.68 +0.5
1,552,041 + Dsui_1489 0.75 +0.5
1,552,044 - Dsui_1489 0.75 +0.5
1,552,215 - Dsui_1489 0.88 +0.5
1,552,255 - +0.5
1,552,264 + -1.5
1,552,272 - -1.5
1,552,411 + -2.5
1,552,693 - Dsui_1490 0.30 -0.5
1,552,703 - Dsui_1490 0.34 -0.5
1,552,781 + Dsui_1490 0.62 -1.1
1,552,791 + Dsui_1490 0.66 -2.8
1,552,803 - Dsui_1490 0.70 +0.5
1,552,971 + -0.3
1,552,973 + Dsui_1491 0.10 -0.3
1,552,979 - Dsui_1491 0.11 -1.1
1,552,997 - Dsui_1491 0.14 -0.5
1,553,048 - Dsui_1491 0.23 +0.5
1,553,191 - Dsui_1491 0.48 -2.1
1,553,209 + Dsui_1491 0.51 -3.1
1,553,252 + Dsui_1491 0.59 -0.5
1,553,309 + Dsui_1491 0.69 -1.1
1,553,351 + Dsui_1491 0.76 -1.1
1,553,394 - Dsui_1491 0.84 +0.5
1,553,404 - Dsui_1491 0.86 -2.8
1,553,418 + Dsui_1491 0.88 -1.1
1,553,530 - -2.1
1,553,540 - -2.5
1,553,655 - -1.1

Or see this region's nucleotide sequence