Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1437 and Dsui_1438 are separated by 9 nucleotides Dsui_1438 and Dsui_1439 are separated by 9 nucleotides
Dsui_1437: Dsui_1437 - chemotaxis protein histidine kinase-like protein, at 1,490,858 to 1,493,092
_1437
Dsui_1438: Dsui_1438 - putative NTP binding protein (contains STAS domain), at 1,493,102 to 1,493,410
_1438
Dsui_1439: Dsui_1439 - methyl-accepting chemotaxis protein, at 1,493,420 to 1,494,691
_1439
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1492.168 kb on - strand, within Dsui_1437 at 1492.247 kb on - strand, within Dsui_1437 at 1492.259 kb on - strand, within Dsui_1437 at 1492.349 kb on + strand, within Dsui_1437 at 1492.349 kb on + strand, within Dsui_1437 at 1492.405 kb on + strand, within Dsui_1437 at 1492.405 kb on + strand, within Dsui_1437 at 1492.494 kb on + strand, within Dsui_1437 at 1492.583 kb on + strand, within Dsui_1437 at 1492.591 kb on - strand, within Dsui_1437 at 1492.672 kb on + strand at 1492.826 kb on + strand, within Dsui_1437 at 1492.834 kb on - strand, within Dsui_1437 at 1492.834 kb on - strand, within Dsui_1437 at 1493.291 kb on - strand, within Dsui_1438 at 1493.325 kb on - strand, within Dsui_1438 at 1493.356 kb on - strand, within Dsui_1438 at 1493.379 kb on - strand, within Dsui_1438 at 1493.405 kb on + strand at 1493.418 kb on + strand at 1493.426 kb on - strand at 1493.490 kb on - strand at 1493.531 kb on + strand at 1493.552 kb on - strand, within Dsui_1439 at 1493.589 kb on + strand, within Dsui_1439 at 1493.599 kb on + strand, within Dsui_1439 at 1493.667 kb on + strand, within Dsui_1439 at 1493.692 kb on - strand, within Dsui_1439 at 1493.734 kb on - strand, within Dsui_1439 at 1493.782 kb on + strand, within Dsui_1439 at 1493.790 kb on + strand, within Dsui_1439 at 1493.790 kb on - strand, within Dsui_1439 at 1493.838 kb on + strand, within Dsui_1439 at 1494.073 kb on + strand, within Dsui_1439 at 1494.160 kb on - strand, within Dsui_1439 at 1494.183 kb on - strand, within Dsui_1439 at 1494.328 kb on + strand, within Dsui_1439
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 1,492,168 - Dsui_1437 0.59 -0.0 1,492,247 - Dsui_1437 0.62 -0.1 1,492,259 - Dsui_1437 0.63 -0.1 1,492,349 + Dsui_1437 0.67 +0.4 1,492,349 + Dsui_1437 0.67 +0.4 1,492,405 + Dsui_1437 0.69 -2.2 1,492,405 + Dsui_1437 0.69 -0.6 1,492,494 + Dsui_1437 0.73 -3.4 1,492,583 + Dsui_1437 0.77 -1.2 1,492,591 - Dsui_1437 0.78 -0.5 1,492,672 + +0.4 1,492,826 + Dsui_1437 0.88 -1.9 1,492,834 - Dsui_1437 0.88 +0.1 1,492,834 - Dsui_1437 0.88 -0.1 1,493,291 - Dsui_1438 0.61 +0.1 1,493,325 - Dsui_1438 0.72 +0.1 1,493,356 - Dsui_1438 0.82 -0.0 1,493,379 - Dsui_1438 0.90 -0.2 1,493,405 + -2.6 1,493,418 + -1.6 1,493,426 - +0.1 1,493,490 - -0.1 1,493,531 + -1.2 1,493,552 - Dsui_1439 0.10 -0.0 1,493,589 + Dsui_1439 0.13 +0.4 1,493,599 + Dsui_1439 0.14 -1.9 1,493,667 + Dsui_1439 0.19 -1.9 1,493,692 - Dsui_1439 0.21 -0.1 1,493,734 - Dsui_1439 0.25 -0.2 1,493,782 + Dsui_1439 0.28 -0.6 1,493,790 + Dsui_1439 0.29 -0.6 1,493,790 - Dsui_1439 0.29 +0.0 1,493,838 + Dsui_1439 0.33 -1.6 1,494,073 + Dsui_1439 0.51 -1.2 1,494,160 - Dsui_1439 0.58 -0.1 1,494,183 - Dsui_1439 0.60 +0.1 1,494,328 + Dsui_1439 0.71 -2.4
Or see this region's nucleotide sequence