Strain Fitness in Dechlorosoma suillum PS around Dsui_0981

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0980 and Dsui_0981 are separated by 20 nucleotidesDsui_0981 and Dsui_0982 are separated by 63 nucleotides Dsui_0980: Dsui_0980 - acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 1,006,300 to 1,007,907 _0980 Dsui_0981: Dsui_0981 - enoyl-CoA hydratase/carnithine racemase, at 1,007,928 to 1,008,719 _0981 Dsui_0982: Dsui_0982 - acetyl/propionyl-CoA carboxylase, alpha subunit, at 1,008,783 to 1,010,786 _0982 Position (kb) 1007 1008 1009Strain fitness (log2 ratio) -1 0 1at 1007.432 kb on + strand, within Dsui_0980at 1007.530 kb on - strand, within Dsui_0980at 1007.654 kb on - strand, within Dsui_0980at 1007.751 kb on + strandat 1007.790 kb on + strandat 1008.053 kb on + strand, within Dsui_0981at 1008.084 kb on - strand, within Dsui_0981at 1008.613 kb on + strand, within Dsui_0981at 1008.637 kb on - strand, within Dsui_0981at 1008.927 kb on + strandat 1009.031 kb on - strand, within Dsui_0982at 1009.295 kb on + strandat 1009.318 kb on - strandat 1009.385 kb on + strand, within Dsui_0982at 1009.476 kb on - strand, within Dsui_0982at 1009.486 kb on + strand, within Dsui_0982at 1009.646 kb on + strand, within Dsui_0982at 1009.703 kb on - strandat 1009.704 kb on - strand, within Dsui_0982

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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1,007,432 + Dsui_0980 0.70 -0.7
1,007,530 - Dsui_0980 0.76 +0.5
1,007,654 - Dsui_0980 0.84 -1.1
1,007,751 + +0.5
1,007,790 + -0.4
1,008,053 + Dsui_0981 0.16 -0.3
1,008,084 - Dsui_0981 0.20 -1.1
1,008,613 + Dsui_0981 0.86 -0.8
1,008,637 - Dsui_0981 0.90 -1.5
1,008,927 + -0.1
1,009,031 - Dsui_0982 0.12 -1.5
1,009,295 + -0.5
1,009,318 - -0.5
1,009,385 + Dsui_0982 0.30 -0.7
1,009,476 - Dsui_0982 0.35 +0.5
1,009,486 + Dsui_0982 0.35 +0.5
1,009,646 + Dsui_0982 0.43 -1.5
1,009,703 - +0.5
1,009,704 - Dsui_0982 0.46 -1.1

Or see this region's nucleotide sequence