Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0919 and Dsui_0920 overlap by 4 nucleotides Dsui_0920 and Dsui_0921 overlap by 4 nucleotides
Dsui_0919: Dsui_0919 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 942,804 to 943,955
_0919
Dsui_0920: Dsui_0920 - fructose-2,6-bisphosphatase, at 943,952 to 944,620
_0920
Dsui_0921: Dsui_0921 - PAS domain S-box, at 944,617 to 948,909
_0921
Position (kb)
943
944
945 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 943.010 kb on + strand, within Dsui_0919 at 943.073 kb on + strand, within Dsui_0919 at 943.153 kb on - strand, within Dsui_0919 at 943.183 kb on - strand, within Dsui_0919 at 943.187 kb on + strand, within Dsui_0919 at 943.277 kb on + strand, within Dsui_0919 at 943.284 kb on - strand, within Dsui_0919 at 943.285 kb on - strand, within Dsui_0919 at 943.361 kb on + strand, within Dsui_0919 at 943.369 kb on - strand, within Dsui_0919 at 943.396 kb on - strand, within Dsui_0919 at 943.478 kb on + strand, within Dsui_0919 at 943.595 kb on + strand, within Dsui_0919 at 943.644 kb on + strand, within Dsui_0919 at 944.206 kb on + strand, within Dsui_0920 at 944.341 kb on + strand, within Dsui_0920 at 944.595 kb on + strand at 944.595 kb on + strand at 944.595 kb on + strand at 944.595 kb on + strand at 944.603 kb on - strand at 944.635 kb on + strand at 944.830 kb on - strand at 944.846 kb on - strand at 945.012 kb on + strand at 945.122 kb on + strand, within Dsui_0921 at 945.221 kb on + strand, within Dsui_0921 at 945.269 kb on + strand, within Dsui_0921 at 945.344 kb on + strand, within Dsui_0921 at 945.393 kb on + strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.401 kb on - strand, within Dsui_0921 at 945.441 kb on + strand, within Dsui_0921 at 945.480 kb on + strand, within Dsui_0921 at 945.505 kb on - strand, within Dsui_0921
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 943,010 + Dsui_0919 0.18 -0.5 943,073 + Dsui_0919 0.23 -1.7 943,153 - Dsui_0919 0.30 -1.1 943,183 - Dsui_0919 0.33 -0.5 943,187 + Dsui_0919 0.33 -1.6 943,277 + Dsui_0919 0.41 +0.5 943,284 - Dsui_0919 0.42 -0.5 943,285 - Dsui_0919 0.42 -1.1 943,361 + Dsui_0919 0.48 +0.5 943,369 - Dsui_0919 0.49 +0.5 943,396 - Dsui_0919 0.51 +0.5 943,478 + Dsui_0919 0.59 -0.8 943,595 + Dsui_0919 0.69 -1.9 943,644 + Dsui_0919 0.73 -1.5 944,206 + Dsui_0920 0.38 -1.1 944,341 + Dsui_0920 0.58 +0.5 944,595 + -1.4 944,595 + +1.5 944,595 + +0.5 944,595 + -0.5 944,603 - -1.5 944,635 + -0.5 944,830 - +3.0 944,846 - -0.5 945,012 + -1.1 945,122 + Dsui_0921 0.12 -2.0 945,221 + Dsui_0921 0.14 -0.5 945,269 + Dsui_0921 0.15 -0.9 945,344 + Dsui_0921 0.17 -3.4 945,393 + Dsui_0921 0.18 -1.1 945,401 - Dsui_0921 0.18 -2.4 945,401 - Dsui_0921 0.18 +0.5 945,401 - Dsui_0921 0.18 +0.5 945,441 + Dsui_0921 0.19 -2.7 945,480 + Dsui_0921 0.20 +0.5 945,505 - Dsui_0921 0.21 -0.5
Or see this region's nucleotide sequence