Strain Fitness in Dechlorosoma suillum PS around Dsui_0848

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0846 and Dsui_0847 overlap by 4 nucleotidesDsui_0847 and Dsui_0848 are separated by 4 nucleotidesDsui_0848 and Dsui_0849 overlap by 4 nucleotides Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142 _0846 Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780 _0847 Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567 _0848 Dsui_0849: Dsui_0849 - ParB-like partition protein, at 866,564 to 867,397 _0849 Position (kb) 865 866 867Strain fitness (log2 ratio) -3 -2 -1 0 1at 864.801 kb on + strand, within Dsui_0846at 864.816 kb on + strand, within Dsui_0846at 864.944 kb on + strand, within Dsui_0846at 865.143 kb on - strandat 865.186 kb on + strandat 865.196 kb on + strandat 865.196 kb on + strandat 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.216 kb on + strand, within Dsui_0847at 865.224 kb on - strand, within Dsui_0847at 865.233 kb on + strand, within Dsui_0847at 865.275 kb on - strand, within Dsui_0847at 865.282 kb on + strand, within Dsui_0847at 865.291 kb on + strand, within Dsui_0847at 865.299 kb on - strand, within Dsui_0847at 865.299 kb on - strand, within Dsui_0847at 865.313 kb on - strand, within Dsui_0847at 865.565 kb on + strand, within Dsui_0847at 865.608 kb on + strand, within Dsui_0847at 865.608 kb on + strand, within Dsui_0847at 865.712 kb on + strand, within Dsui_0847at 865.712 kb on + strand, within Dsui_0847at 865.775 kb on + strandat 865.790 kb on + strandat 867.531 kb on + strandat 867.539 kb on - strandat 867.548 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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864,801 + Dsui_0846 0.82 -3.2
864,816 + Dsui_0846 0.83 -1.7
864,944 + Dsui_0846 0.89 -2.1
865,143 - -2.1
865,186 + -0.5
865,196 + +0.5
865,196 + +0.1
865,216 + Dsui_0847 0.12 +0.4
865,216 + Dsui_0847 0.12 +0.3
865,216 + Dsui_0847 0.12 +0.5
865,216 + Dsui_0847 0.12 -0.2
865,224 - Dsui_0847 0.13 -1.1
865,233 + Dsui_0847 0.15 +0.2
865,275 - Dsui_0847 0.21 +0.4
865,282 + Dsui_0847 0.22 -0.0
865,291 + Dsui_0847 0.24 -0.2
865,299 - Dsui_0847 0.25 +0.4
865,299 - Dsui_0847 0.25 -2.4
865,313 - Dsui_0847 0.27 +0.4
865,565 + Dsui_0847 0.66 +0.2
865,608 + Dsui_0847 0.73 +0.5
865,608 + Dsui_0847 0.73 +0.4
865,712 + Dsui_0847 0.89 +0.2
865,712 + Dsui_0847 0.89 -0.2
865,775 + -1.1
865,790 + -2.6
867,531 + -0.3
867,539 - -0.6
867,548 + +0.2

Or see this region's nucleotide sequence