Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0840 and Dsui_0841 are separated by 148 nucleotides Dsui_0841 and Dsui_0842 overlap by 1 nucleotides
Dsui_0840: Dsui_0840 - ABC-type branched-chain amino acid transport system, periplasmic component, at 855,039 to 856,208
_0840
Dsui_0841: Dsui_0841 - ABC-type branched-chain amino acid transport systems, ATPase component, at 856,357 to 857,112
_0841
Dsui_0842: Dsui_0842 - ABC-type branched-chain amino acid transport systems, ATPase component, at 857,112 to 858,893
_0842
Position (kb) 856
857
858 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 855.473 kb on - strand at 855.503 kb on + strand, within Dsui_0840 at 855.514 kb on + strand, within Dsui_0840 at 855.514 kb on + strand, within Dsui_0840 at 855.542 kb on - strand, within Dsui_0840 at 855.696 kb on - strand, within Dsui_0840 at 855.729 kb on + strand, within Dsui_0840 at 855.737 kb on - strand, within Dsui_0840 at 855.758 kb on + strand, within Dsui_0840 at 855.768 kb on + strand, within Dsui_0840 at 855.776 kb on - strand, within Dsui_0840 at 855.909 kb on + strand, within Dsui_0840 at 855.919 kb on + strand, within Dsui_0840 at 855.985 kb on - strand, within Dsui_0840 at 856.009 kb on + strand, within Dsui_0840 at 856.014 kb on + strand, within Dsui_0840 at 856.045 kb on + strand, within Dsui_0840 at 856.045 kb on - strand, within Dsui_0840 at 856.055 kb on + strand at 856.095 kb on - strand at 856.105 kb on + strand at 856.105 kb on + strand at 856.105 kb on + strand at 856.105 kb on + strand at 856.113 kb on + strand at 856.113 kb on - strand at 856.113 kb on - strand at 856.120 kb on + strand at 856.129 kb on - strand at 856.169 kb on + strand at 856.172 kb on - strand at 856.394 kb on - strand at 856.419 kb on + strand at 856.601 kb on - strand, within Dsui_0841 at 856.723 kb on + strand at 856.734 kb on + strand, within Dsui_0841 at 856.750 kb on - strand, within Dsui_0841 at 856.776 kb on + strand, within Dsui_0841 at 856.819 kb on + strand, within Dsui_0841 at 856.857 kb on - strand, within Dsui_0841 at 856.859 kb on + strand, within Dsui_0841 at 856.863 kb on - strand, within Dsui_0841 at 856.882 kb on + strand, within Dsui_0841 at 856.952 kb on - strand, within Dsui_0841 at 856.962 kb on - strand, within Dsui_0841 at 857.022 kb on + strand, within Dsui_0841 at 857.030 kb on - strand, within Dsui_0841 at 857.030 kb on - strand, within Dsui_0841 at 857.095 kb on - strand at 857.118 kb on - strand at 857.130 kb on - strand at 857.130 kb on - strand at 857.164 kb on + strand at 857.207 kb on + strand at 857.577 kb on + strand, within Dsui_0842 at 857.583 kb on - strand, within Dsui_0842 at 857.733 kb on - strand, within Dsui_0842 at 857.735 kb on - strand, within Dsui_0842 at 857.758 kb on + strand, within Dsui_0842 at 857.993 kb on - strand, within Dsui_0842 at 858.084 kb on - strand, within Dsui_0842
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 855,473 - +0.5 855,503 + Dsui_0840 0.40 -2.7 855,514 + Dsui_0840 0.41 -1.5 855,514 + Dsui_0840 0.41 +0.5 855,542 - Dsui_0840 0.43 -0.5 855,696 - Dsui_0840 0.56 -0.5 855,729 + Dsui_0840 0.59 -3.5 855,737 - Dsui_0840 0.60 +0.5 855,758 + Dsui_0840 0.61 -0.5 855,768 + Dsui_0840 0.62 -1.1 855,776 - Dsui_0840 0.63 -2.1 855,909 + Dsui_0840 0.74 +0.5 855,919 + Dsui_0840 0.75 +0.5 855,985 - Dsui_0840 0.81 -1.5 856,009 + Dsui_0840 0.83 +1.0 856,014 + Dsui_0840 0.83 -0.5 856,045 + Dsui_0840 0.86 -3.4 856,045 - Dsui_0840 0.86 -1.1 856,055 + +0.5 856,095 - +0.5 856,105 + +0.5 856,105 + -2.1 856,105 + -0.1 856,105 + -1.9 856,113 + -1.1 856,113 - +0.5 856,113 - -0.1 856,120 + +0.5 856,129 - -2.7 856,169 + -0.5 856,172 - -0.9 856,394 - -0.1 856,419 + -1.5 856,601 - Dsui_0841 0.32 -0.1 856,723 + +0.5 856,734 + Dsui_0841 0.50 +0.5 856,750 - Dsui_0841 0.52 +0.0 856,776 + Dsui_0841 0.55 -0.5 856,819 + Dsui_0841 0.61 -0.1 856,857 - Dsui_0841 0.66 +0.2 856,859 + Dsui_0841 0.66 +0.5 856,863 - Dsui_0841 0.67 -0.0 856,882 + Dsui_0841 0.69 -0.5 856,952 - Dsui_0841 0.79 -0.0 856,962 - Dsui_0841 0.80 +0.1 857,022 + Dsui_0841 0.88 -0.5 857,030 - Dsui_0841 0.89 +0.2 857,030 - Dsui_0841 0.89 -0.1 857,095 - -0.3 857,118 - -0.2 857,130 - -0.2 857,130 - +0.1 857,164 + -1.6 857,207 + -1.7 857,577 + Dsui_0842 0.26 -1.5 857,583 - Dsui_0842 0.26 +0.1 857,733 - Dsui_0842 0.35 -0.2 857,735 - Dsui_0842 0.35 -0.3 857,758 + Dsui_0842 0.36 -2.1 857,993 - Dsui_0842 0.49 -0.0 858,084 - Dsui_0842 0.55 -0.0
Or see this region's nucleotide sequence