Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0569 and Dsui_0570 are separated by 19 nucleotides Dsui_0570 and Dsui_0571 overlap by 10 nucleotides Dsui_0571 and Dsui_0572 are separated by 9 nucleotides Dsui_0572 and Dsui_0573 are separated by 241 nucleotides
Dsui_0569: Dsui_0569 - hypothetical protein, at 569,562 to 570,041
_0569
Dsui_0570: Dsui_0570 - hypothetical protein, at 570,061 to 570,555
_0570
Dsui_0571: Dsui_0571 - ferredoxin, at 570,546 to 570,869
_0571
Dsui_0572: Dsui_0572 - hypothetical protein, at 570,879 to 571,334
_0572
Dsui_0573: Dsui_0573 - ferredoxin-like protein, at 571,576 to 571,863
_0573
Position (kb)
570
571 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 569.734 kb on - strand, within Dsui_0569 at 569.783 kb on - strand, within Dsui_0569 at 569.827 kb on - strand, within Dsui_0569 at 569.858 kb on + strand at 569.980 kb on - strand, within Dsui_0569 at 569.998 kb on - strand at 570.201 kb on - strand, within Dsui_0570 at 570.250 kb on + strand at 570.393 kb on - strand, within Dsui_0570 at 570.656 kb on - strand, within Dsui_0571 at 570.698 kb on + strand, within Dsui_0571 at 571.022 kb on - strand, within Dsui_0572 at 571.041 kb on - strand, within Dsui_0572 at 571.138 kb on - strand, within Dsui_0572 at 571.171 kb on + strand, within Dsui_0572 at 571.194 kb on + strand, within Dsui_0572 at 571.251 kb on - strand, within Dsui_0572 at 571.297 kb on - strand at 571.317 kb on - strand at 571.406 kb on + strand at 571.416 kb on - strand at 571.458 kb on + strand at 571.534 kb on + strand at 571.534 kb on - strand at 571.535 kb on + strand at 571.535 kb on + strand at 571.535 kb on + strand at 571.535 kb on + strand at 571.543 kb on - strand at 571.543 kb on - strand at 571.562 kb on + strand at 571.701 kb on + strand, within Dsui_0573 at 571.721 kb on - strand, within Dsui_0573 at 571.758 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 569,734 - Dsui_0569 0.36 -1.3 569,783 - Dsui_0569 0.46 +0.3 569,827 - Dsui_0569 0.55 +0.6 569,858 + +0.3 569,980 - Dsui_0569 0.87 -0.7 569,998 - -0.7 570,201 - Dsui_0570 0.28 -0.7 570,250 + +0.3 570,393 - Dsui_0570 0.67 -2.9 570,656 - Dsui_0571 0.34 -0.6 570,698 + Dsui_0571 0.47 -2.7 571,022 - Dsui_0572 0.31 -1.0 571,041 - Dsui_0572 0.36 -0.7 571,138 - Dsui_0572 0.57 -1.3 571,171 + Dsui_0572 0.64 -1.3 571,194 + Dsui_0572 0.69 +0.3 571,251 - Dsui_0572 0.82 -2.4 571,297 - -2.7 571,317 - +0.3 571,406 + +0.3 571,416 - -1.7 571,458 + +0.3 571,534 + +0.3 571,534 - -1.8 571,535 + -1.3 571,535 + -1.7 571,535 + +0.3 571,535 + +0.3 571,543 - -0.7 571,543 - -1.3 571,562 + -1.3 571,701 + Dsui_0573 0.43 -2.3 571,721 - Dsui_0573 0.50 -1.3 571,758 - -0.7
Or see this region's nucleotide sequence