Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0452 and Dsui_0453 are separated by 7 nucleotides Dsui_0453 and Dsui_0454 overlap by 17 nucleotides Dsui_0454 and Dsui_0455 are separated by 3 nucleotides Dsui_0455 and Dsui_0456 are separated by 90 nucleotides
Dsui_0452: Dsui_0452 - iojap-like ribosome-associated protein, at 458,157 to 458,528
_0452
Dsui_0453: Dsui_0453 - nicotinate/nicotinamide nucleotide adenylyltransferase, at 458,536 to 459,210
_0453
Dsui_0454: Dsui_0454 - hypothetical protein, at 459,194 to 460,024
_0454
Dsui_0455: Dsui_0455 - putative integral membrane protein, at 460,028 to 460,786
_0455
Dsui_0456: Dsui_0456 - homoserine kinase, Neisseria type, at 460,877 to 461,818
_0456
Position (kb) 459
460
461 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 458.379 kb on + strand at 458.441 kb on + strand, within Dsui_0452 at 458.442 kb on - strand, within Dsui_0452 at 458.449 kb on - strand, within Dsui_0452 at 458.473 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.491 kb on - strand at 459.200 kb on - strand at 459.200 kb on - strand at 459.231 kb on - strand at 459.431 kb on - strand, within Dsui_0454 at 459.543 kb on - strand, within Dsui_0454 at 459.942 kb on - strand at 459.973 kb on - strand at 460.021 kb on + strand at 460.059 kb on + strand at 460.067 kb on - strand at 460.067 kb on - strand at 460.140 kb on + strand at 460.148 kb on - strand, within Dsui_0455 at 460.226 kb on - strand, within Dsui_0455 at 460.241 kb on - strand, within Dsui_0455 at 460.435 kb on + strand at 460.439 kb on - strand, within Dsui_0455 at 460.449 kb on - strand, within Dsui_0455 at 460.609 kb on - strand, within Dsui_0455 at 460.611 kb on + strand at 460.619 kb on - strand, within Dsui_0455 at 460.645 kb on - strand, within Dsui_0455 at 460.650 kb on + strand at 460.926 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 458,379 + +0.3 458,441 + Dsui_0452 0.76 -0.7 458,442 - Dsui_0452 0.77 -0.3 458,449 - Dsui_0452 0.78 -0.4 458,473 + Dsui_0452 0.85 +0.3 458,483 + Dsui_0452 0.88 -2.0 458,483 + -0.7 458,483 + Dsui_0452 0.88 +0.3 458,483 + Dsui_0452 0.88 -2.0 458,491 - -0.3 459,200 - -1.0 459,200 - -1.1 459,231 - -2.4 459,431 - Dsui_0454 0.29 -1.8 459,543 - Dsui_0454 0.42 -1.3 459,942 - -3.3 459,973 - -1.6 460,021 + +0.3 460,059 + -1.7 460,067 - -0.5 460,067 - -0.9 460,140 + +0.3 460,148 - Dsui_0455 0.16 -0.5 460,226 - Dsui_0455 0.26 -0.9 460,241 - Dsui_0455 0.28 -0.7 460,435 + +0.3 460,439 - Dsui_0455 0.54 -1.0 460,449 - Dsui_0455 0.55 -1.0 460,609 - Dsui_0455 0.77 -1.8 460,611 + +0.3 460,619 - Dsui_0455 0.78 -1.1 460,645 - Dsui_0455 0.81 -1.5 460,650 + +0.3 460,926 - -0.3
Or see this region's nucleotide sequence