Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0449 and Dsui_0450 are separated by 72 nucleotides Dsui_0450 and Dsui_0451 are separated by 15 nucleotides Dsui_0451 and Dsui_0452 are separated by 8 nucleotides Dsui_0452 and Dsui_0453 are separated by 7 nucleotides
Dsui_0449: Dsui_0449 - undecaprenyl-diphosphatase UppP, at 456,133 to 456,957
_0449
Dsui_0450: Dsui_0450 - MAF protein, at 457,030 to 457,650
_0450
Dsui_0451: Dsui_0451 - hypothetical protein, at 457,666 to 458,148
_0451
Dsui_0452: Dsui_0452 - iojap-like ribosome-associated protein, at 458,157 to 458,528
_0452
Dsui_0453: Dsui_0453 - nicotinate/nicotinamide nucleotide adenylyltransferase, at 458,536 to 459,210
_0453
Position (kb) 457
458
459 Strain fitness (log2 ratio) -2
-1
0
1 at 457.057 kb on - strand at 457.086 kb on - strand at 457.217 kb on - strand, within Dsui_0450 at 457.263 kb on + strand, within Dsui_0450 at 457.325 kb on - strand, within Dsui_0450 at 457.445 kb on - strand, within Dsui_0450 at 457.445 kb on - strand, within Dsui_0450 at 457.454 kb on + strand, within Dsui_0450 at 457.503 kb on + strand at 457.559 kb on + strand, within Dsui_0450 at 457.645 kb on + strand at 457.712 kb on + strand at 457.720 kb on - strand, within Dsui_0451 at 457.720 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.758 kb on + strand at 457.758 kb on + strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.917 kb on - strand, within Dsui_0451 at 457.933 kb on - strand, within Dsui_0451 at 457.965 kb on - strand, within Dsui_0451 at 458.033 kb on - strand, within Dsui_0451 at 458.035 kb on + strand at 458.080 kb on - strand, within Dsui_0451 at 458.082 kb on + strand, within Dsui_0451 at 458.092 kb on + strand, within Dsui_0451 at 458.100 kb on - strand at 458.379 kb on + strand at 458.441 kb on + strand, within Dsui_0452 at 458.442 kb on - strand, within Dsui_0452 at 458.449 kb on - strand, within Dsui_0452 at 458.473 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand at 458.483 kb on + strand, within Dsui_0452 at 458.483 kb on + strand, within Dsui_0452 at 458.491 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 457,057 - -0.0 457,086 - -0.6 457,217 - Dsui_0450 0.30 -0.6 457,263 + Dsui_0450 0.38 -1.3 457,325 - Dsui_0450 0.48 -0.5 457,445 - Dsui_0450 0.67 -0.4 457,445 - Dsui_0450 0.67 -0.2 457,454 + Dsui_0450 0.68 -1.3 457,503 + +0.3 457,559 + Dsui_0450 0.85 -2.5 457,645 + -0.7 457,712 + -1.3 457,720 - Dsui_0451 0.11 +0.1 457,720 - Dsui_0451 0.11 -0.2 457,739 - Dsui_0451 0.15 +0.1 457,739 - Dsui_0451 0.15 -0.1 457,758 + +0.3 457,758 + Dsui_0451 0.19 -2.3 457,766 - Dsui_0451 0.21 -0.2 457,766 - Dsui_0451 0.21 -0.0 457,917 - Dsui_0451 0.52 -0.2 457,933 - Dsui_0451 0.55 -0.2 457,965 - Dsui_0451 0.62 -0.2 458,033 - Dsui_0451 0.76 +0.4 458,035 + +0.3 458,080 - Dsui_0451 0.86 -0.2 458,082 + Dsui_0451 0.86 -2.5 458,092 + Dsui_0451 0.88 -1.7 458,100 - -0.2 458,379 + +0.3 458,441 + Dsui_0452 0.76 -0.7 458,442 - Dsui_0452 0.77 -0.3 458,449 - Dsui_0452 0.78 -0.4 458,473 + Dsui_0452 0.85 +0.3 458,483 + Dsui_0452 0.88 -2.0 458,483 + -0.7 458,483 + Dsui_0452 0.88 +0.3 458,483 + Dsui_0452 0.88 -2.0 458,491 - -0.3
Or see this region's nucleotide sequence