Strain Fitness in Dechlorosoma suillum PS around Dsui_0422

Experiment: ALP with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0421 and Dsui_0422 are separated by 330 nucleotidesDsui_0422 and Dsui_0423 are separated by 50 nucleotides Dsui_0421: Dsui_0421 - carbonic anhydrase, at 422,683 to 424,119 _0421 Dsui_0422: Dsui_0422 - thiamine biosynthesis protein ThiC, at 424,450 to 426,366 _0422 Dsui_0423: Dsui_0423 - putative permease, at 426,417 to 427,475 _0423 Position (kb) 424 425 426 427Strain fitness (log2 ratio) -7 -6 -5 -4 -3 -2 -1 0 1at 423.463 kb on + strandat 423.625 kb on - strand, within Dsui_0421at 423.647 kb on + strand, within Dsui_0421at 423.769 kb on - strand, within Dsui_0421at 423.857 kb on + strand, within Dsui_0421at 423.897 kb on - strand, within Dsui_0421at 423.935 kb on + strand, within Dsui_0421at 423.985 kb on - strandat 424.115 kb on + strandat 424.115 kb on + strandat 424.123 kb on - strandat 424.140 kb on + strandat 424.140 kb on + strandat 424.151 kb on + strandat 424.151 kb on + strandat 424.159 kb on - strandat 424.159 kb on - strandat 424.159 kb on - strandat 424.181 kb on + strandat 424.192 kb on + strandat 424.242 kb on + strandat 424.242 kb on + strandat 424.250 kb on - strandat 424.369 kb on + strandat 426.433 kb on + strandat 426.496 kb on - strandat 426.566 kb on - strand, within Dsui_0423at 426.596 kb on + strand, within Dsui_0423at 426.691 kb on - strand, within Dsui_0423at 426.700 kb on + strandat 426.737 kb on + strandat 426.750 kb on - strand, within Dsui_0423at 426.753 kb on + strand, within Dsui_0423at 426.756 kb on - strand, within Dsui_0423at 426.845 kb on - strand, within Dsui_0423at 426.850 kb on - strand, within Dsui_0423at 426.917 kb on - strand, within Dsui_0423at 427.006 kb on - strand, within Dsui_0423at 427.067 kb on - strand, within Dsui_0423at 427.091 kb on + strand, within Dsui_0423at 427.184 kb on - strand, within Dsui_0423at 427.282 kb on - strand, within Dsui_0423

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM
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423,463 + +0.3
423,625 - Dsui_0421 0.66 -0.7
423,647 + Dsui_0421 0.67 -0.7
423,769 - Dsui_0421 0.76 +0.3
423,857 + Dsui_0421 0.82 -1.2
423,897 - Dsui_0421 0.84 -0.7
423,935 + Dsui_0421 0.87 +0.3
423,985 - -0.7
424,115 + +0.3
424,115 + -1.2
424,123 - -2.0
424,140 + +0.3
424,140 + -1.7
424,151 + +0.3
424,151 + +0.3
424,159 - -0.7
424,159 - -1.2
424,159 - -1.2
424,181 + -1.2
424,192 + -1.2
424,242 + -0.2
424,242 + +0.3
424,250 - +0.3
424,369 + -0.8
426,433 + -0.5
426,496 - -5.2
426,566 - Dsui_0423 0.14 -5.7
426,596 + Dsui_0423 0.17 -0.2
426,691 - Dsui_0423 0.26 -4.0
426,700 + +0.3
426,737 + +0.3
426,750 - Dsui_0423 0.31 -6.9
426,753 + Dsui_0423 0.32 +0.3
426,756 - Dsui_0423 0.32 -6.7
426,845 - Dsui_0423 0.40 -5.2
426,850 - Dsui_0423 0.41 -4.2
426,917 - Dsui_0423 0.47 -5.5
427,006 - Dsui_0423 0.56 -3.4
427,067 - Dsui_0423 0.61 -2.8
427,091 + Dsui_0423 0.64 +0.3
427,184 - Dsui_0423 0.72 -4.3
427,282 - Dsui_0423 0.82 -2.8

Or see this region's nucleotide sequence