Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0296 and Dsui_0297 are separated by 250 nucleotides Dsui_0297 and Dsui_0298 are separated by 64 nucleotides
Dsui_0296: Dsui_0296 - hypothetical protein, at 297,726 to 298,508
_0296
Dsui_0297: Dsui_0297 - sugar fermentation stimulation protein, at 298,759 to 299,478
_0297
Dsui_0298: Dsui_0298 - Kef-type K+ ransport system, predicted NAD-binding component, at 299,543 to 300,421
_0298
Position (kb) 298
299
300 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 297.767 kb on + strand at 297.801 kb on + strand at 297.868 kb on - strand at 297.879 kb on + strand, within Dsui_0296 at 298.136 kb on - strand at 298.141 kb on - strand, within Dsui_0296 at 298.146 kb on - strand, within Dsui_0296 at 298.416 kb on - strand at 298.452 kb on + strand at 298.517 kb on + strand at 298.830 kb on - strand at 298.860 kb on + strand, within Dsui_0297 at 298.860 kb on + strand at 298.938 kb on - strand, within Dsui_0297 at 298.960 kb on - strand, within Dsui_0297 at 298.960 kb on - strand, within Dsui_0297 at 298.986 kb on + strand at 298.991 kb on - strand, within Dsui_0297 at 299.249 kb on + strand, within Dsui_0297 at 299.284 kb on + strand, within Dsui_0297 at 299.346 kb on - strand at 299.369 kb on + strand at 299.409 kb on + strand at 299.464 kb on - strand at 299.554 kb on - strand at 299.715 kb on - strand, within Dsui_0298 at 299.772 kb on + strand, within Dsui_0298 at 299.796 kb on - strand, within Dsui_0298 at 299.890 kb on - strand, within Dsui_0298 at 299.896 kb on - strand, within Dsui_0298 at 299.960 kb on - strand, within Dsui_0298 at 299.980 kb on + strand at 299.999 kb on - strand, within Dsui_0298 at 300.001 kb on + strand, within Dsui_0298 at 300.001 kb on + strand, within Dsui_0298 at 300.027 kb on - strand, within Dsui_0298 at 300.098 kb on - strand, within Dsui_0298 at 300.149 kb on + strand, within Dsui_0298 at 300.149 kb on + strand at 300.152 kb on - strand, within Dsui_0298 at 300.174 kb on + strand at 300.182 kb on - strand, within Dsui_0298 at 300.237 kb on - strand, within Dsui_0298 at 300.243 kb on - strand, within Dsui_0298 at 300.272 kb on + strand, within Dsui_0298
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 297,767 + -0.6 297,801 + -1.2 297,868 - -0.6 297,879 + Dsui_0296 0.20 -2.2 298,136 - -0.6 298,141 - Dsui_0296 0.53 -2.0 298,146 - Dsui_0296 0.54 -0.6 298,416 - +0.4 298,452 + -2.0 298,517 + -2.0 298,830 - +0.4 298,860 + Dsui_0297 0.14 -0.6 298,860 + +0.4 298,938 - Dsui_0297 0.25 -2.6 298,960 - Dsui_0297 0.28 -0.6 298,960 - Dsui_0297 0.28 -2.0 298,986 + +0.4 298,991 - Dsui_0297 0.32 -3.1 299,249 + Dsui_0297 0.68 -1.2 299,284 + Dsui_0297 0.73 -1.2 299,346 - +0.4 299,369 + -0.6 299,409 + +0.4 299,464 - -1.2 299,554 - -1.0 299,715 - Dsui_0298 0.20 -0.1 299,772 + Dsui_0298 0.26 -1.2 299,796 - Dsui_0298 0.29 -0.4 299,890 - Dsui_0298 0.39 -1.5 299,896 - Dsui_0298 0.40 -1.3 299,960 - Dsui_0298 0.47 -1.9 299,980 + +0.4 299,999 - Dsui_0298 0.52 +0.7 300,001 + Dsui_0298 0.52 +0.4 300,001 + Dsui_0298 0.52 +0.4 300,027 - Dsui_0298 0.55 -1.1 300,098 - Dsui_0298 0.63 -0.7 300,149 + Dsui_0298 0.69 -2.5 300,149 + +0.4 300,152 - Dsui_0298 0.69 -0.9 300,174 + +0.4 300,182 - Dsui_0298 0.73 +0.3 300,237 - Dsui_0298 0.79 -1.6 300,243 - Dsui_0298 0.80 -1.2 300,272 + Dsui_0298 0.83 -1.2
Or see this region's nucleotide sequence