Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0246 and Dsui_0248 are separated by 844 nucleotides Dsui_0248 and Dsui_0249 overlap by 4 nucleotides Dsui_0249 and Dsui_0250 are separated by 39 nucleotides
Dsui_0246: Dsui_0246 - mraZ protein, at 246,217 to 246,666
_0246
Dsui_0248: Dsui_0248 - Protein of unknown function (DUF3025), at 247,511 to 248,326
_0248
Dsui_0249: Dsui_0249 - hypothetical protein, at 248,323 to 248,832
_0249
Dsui_0250: Dsui_0250 - dihydroorotase, homodimeric type, at 248,872 to 249,906
_0250
Position (kb) 247
248
249 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 246.527 kb on - strand, within Dsui_0246 at 246.532 kb on - strand, within Dsui_0246 at 246.538 kb on - strand, within Dsui_0246 at 246.625 kb on - strand at 246.690 kb on - strand at 246.728 kb on - strand at 246.753 kb on - strand at 246.984 kb on + strand at 247.026 kb on - strand at 247.072 kb on - strand at 247.518 kb on + strand at 247.518 kb on + strand at 247.521 kb on - strand at 247.771 kb on - strand, within Dsui_0248 at 247.876 kb on - strand, within Dsui_0248 at 247.914 kb on - strand at 247.932 kb on - strand, within Dsui_0248 at 248.030 kb on + strand, within Dsui_0248 at 248.035 kb on + strand at 248.051 kb on + strand at 248.189 kb on + strand, within Dsui_0248 at 248.427 kb on + strand, within Dsui_0249 at 248.434 kb on + strand, within Dsui_0249 at 248.571 kb on + strand at 248.579 kb on - strand, within Dsui_0249
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 246,527 - Dsui_0246 0.69 -0.1 246,532 - Dsui_0246 0.70 -0.2 246,538 - Dsui_0246 0.71 -0.4 246,625 - -0.1 246,690 - -3.3 246,728 - +0.1 246,753 - -0.4 246,984 + -1.2 247,026 - -1.8 247,072 - -0.9 247,518 + -0.6 247,518 + -2.5 247,521 - -1.2 247,771 - Dsui_0248 0.32 -0.8 247,876 - Dsui_0248 0.45 -0.9 247,914 - +0.4 247,932 - Dsui_0248 0.52 -2.8 248,030 + Dsui_0248 0.64 -0.6 248,035 + -0.6 248,051 + +0.4 248,189 + Dsui_0248 0.83 -1.2 248,427 + Dsui_0249 0.20 -1.6 248,434 + Dsui_0249 0.22 -1.6 248,571 + -0.6 248,579 - Dsui_0249 0.50 +0.1
Or see this region's nucleotide sequence