Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0208 and Dsui_0209 overlap by 1 nucleotides Dsui_0209 and Dsui_0210 overlap by 1 nucleotides
Dsui_0208: Dsui_0208 - hypothetical protein, at 206,979 to 210,539
_0208
Dsui_0209: Dsui_0209 - hypothetical protein, at 210,539 to 211,630
_0209
Dsui_0210: Dsui_0210 - hypothetical protein, at 211,630 to 213,639
_0210
Position (kb) 210
211
212 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 209.624 kb on - strand, within Dsui_0208 at 209.767 kb on + strand at 209.767 kb on + strand, within Dsui_0208 at 209.767 kb on + strand, within Dsui_0208 at 209.775 kb on - strand, within Dsui_0208 at 209.775 kb on - strand, within Dsui_0208 at 209.787 kb on + strand, within Dsui_0208 at 209.847 kb on + strand, within Dsui_0208 at 209.847 kb on + strand, within Dsui_0208 at 209.855 kb on - strand, within Dsui_0208 at 209.933 kb on - strand, within Dsui_0208 at 209.981 kb on - strand, within Dsui_0208 at 210.023 kb on + strand, within Dsui_0208 at 210.030 kb on - strand, within Dsui_0208 at 210.123 kb on - strand, within Dsui_0208 at 210.138 kb on - strand, within Dsui_0208 at 210.363 kb on - strand at 210.432 kb on + strand at 210.452 kb on + strand at 210.477 kb on - strand at 210.704 kb on + strand, within Dsui_0209 at 210.832 kb on + strand, within Dsui_0209 at 210.971 kb on + strand at 211.087 kb on + strand, within Dsui_0209 at 211.258 kb on - strand, within Dsui_0209 at 211.304 kb on + strand, within Dsui_0209 at 211.462 kb on - strand, within Dsui_0209 at 211.671 kb on - strand at 211.700 kb on - strand at 211.899 kb on + strand, within Dsui_0210 at 211.907 kb on - strand, within Dsui_0210 at 211.965 kb on + strand at 211.965 kb on + strand at 211.965 kb on + strand at 211.973 kb on - strand, within Dsui_0210 at 211.973 kb on - strand, within Dsui_0210 at 211.973 kb on - strand at 211.973 kb on - strand, within Dsui_0210 at 211.988 kb on - strand at 212.154 kb on - strand at 212.205 kb on + strand, within Dsui_0210 at 212.223 kb on - strand at 212.223 kb on - strand at 212.223 kb on - strand, within Dsui_0210 at 212.328 kb on + strand, within Dsui_0210 at 212.349 kb on + strand, within Dsui_0210 at 212.398 kb on - strand at 212.509 kb on - strand, within Dsui_0210 at 212.621 kb on + strand, within Dsui_0210
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 209,624 - Dsui_0208 0.74 +0.4 209,767 + -0.6 209,767 + Dsui_0208 0.78 -3.2 209,767 + Dsui_0208 0.78 -1.2 209,775 - Dsui_0208 0.79 -2.2 209,775 - Dsui_0208 0.79 +0.4 209,787 + Dsui_0208 0.79 -2.5 209,847 + Dsui_0208 0.81 +0.4 209,847 + Dsui_0208 0.81 +0.4 209,855 - Dsui_0208 0.81 -1.6 209,933 - Dsui_0208 0.83 +0.4 209,981 - Dsui_0208 0.84 +0.4 210,023 + Dsui_0208 0.85 -2.0 210,030 - Dsui_0208 0.86 -1.2 210,123 - Dsui_0208 0.88 -2.0 210,138 - Dsui_0208 0.89 -2.0 210,363 - +0.4 210,432 + -1.2 210,452 + +0.4 210,477 - +0.4 210,704 + Dsui_0209 0.15 -1.2 210,832 + Dsui_0209 0.27 -0.6 210,971 + -1.2 211,087 + Dsui_0209 0.50 -0.6 211,258 - Dsui_0209 0.66 -1.6 211,304 + Dsui_0209 0.70 -2.5 211,462 - Dsui_0209 0.85 -2.0 211,671 - -0.6 211,700 - +0.4 211,899 + Dsui_0210 0.13 -0.6 211,907 - Dsui_0210 0.14 -1.2 211,965 + +0.4 211,965 + +0.4 211,965 + -1.2 211,973 - Dsui_0210 0.17 -2.0 211,973 - Dsui_0210 0.17 -2.8 211,973 - +0.4 211,973 - Dsui_0210 0.17 +0.4 211,988 - +0.4 212,154 - +0.4 212,205 + Dsui_0210 0.29 -0.6 212,223 - +0.4 212,223 - +0.4 212,223 - Dsui_0210 0.30 +0.4 212,328 + Dsui_0210 0.35 -1.2 212,349 + Dsui_0210 0.36 -1.6 212,398 - +0.4 212,509 - Dsui_0210 0.44 +0.4 212,621 + Dsui_0210 0.49 -1.2
Or see this region's nucleotide sequence