Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0134 and Dsui_0135 overlap by 1 nucleotides Dsui_0135 and Dsui_0136 overlap by 20 nucleotides
Dsui_0134: Dsui_0134 - negative regulator of beta-lactamase expression, at 135,991 to 136,563
_0134
Dsui_0135: Dsui_0135 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 136,563 to 137,936
_0135
Dsui_0136: Dsui_0136 - histidine kinase, at 137,917 to 139,530
_0136
Position (kb)
136
137
138 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 135.572 kb on + strand at 135.580 kb on - strand at 135.727 kb on + strand at 135.735 kb on - strand at 135.735 kb on - strand at 135.812 kb on - strand at 135.819 kb on - strand at 135.863 kb on + strand at 135.894 kb on + strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.902 kb on - strand at 135.924 kb on + strand at 135.926 kb on - strand at 135.926 kb on - strand at 135.932 kb on - strand at 135.932 kb on - strand at 135.947 kb on - strand at 136.005 kb on - strand at 136.007 kb on + strand at 136.007 kb on + strand at 136.015 kb on - strand at 136.015 kb on - strand at 136.023 kb on - strand at 136.068 kb on - strand, within Dsui_0134 at 136.073 kb on + strand, within Dsui_0134 at 136.081 kb on - strand, within Dsui_0134 at 136.129 kb on - strand, within Dsui_0134 at 136.152 kb on - strand at 136.185 kb on + strand, within Dsui_0134 at 136.260 kb on - strand, within Dsui_0134 at 136.260 kb on - strand, within Dsui_0134 at 136.270 kb on - strand, within Dsui_0134 at 136.299 kb on + strand at 136.378 kb on - strand, within Dsui_0134 at 136.384 kb on + strand, within Dsui_0134 at 136.445 kb on + strand, within Dsui_0134 at 136.456 kb on + strand, within Dsui_0134 at 136.489 kb on - strand, within Dsui_0134 at 136.518 kb on + strand at 136.601 kb on + strand at 136.668 kb on - strand at 136.709 kb on - strand, within Dsui_0135 at 136.771 kb on - strand, within Dsui_0135 at 136.783 kb on - strand, within Dsui_0135 at 136.793 kb on + strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.811 kb on - strand, within Dsui_0135 at 136.938 kb on + strand, within Dsui_0135 at 137.100 kb on - strand, within Dsui_0135 at 137.102 kb on + strand, within Dsui_0135 at 137.155 kb on + strand, within Dsui_0135 at 137.221 kb on + strand, within Dsui_0135 at 137.229 kb on - strand, within Dsui_0135 at 137.322 kb on + strand, within Dsui_0135 at 137.350 kb on + strand, within Dsui_0135 at 137.412 kb on + strand, within Dsui_0135 at 137.420 kb on - strand, within Dsui_0135 at 137.454 kb on + strand, within Dsui_0135 at 137.515 kb on + strand at 137.526 kb on - strand, within Dsui_0135 at 137.574 kb on - strand, within Dsui_0135 at 137.604 kb on + strand, within Dsui_0135 at 137.625 kb on - strand, within Dsui_0135 at 137.703 kb on - strand, within Dsui_0135 at 137.711 kb on + strand, within Dsui_0135 at 137.719 kb on - strand, within Dsui_0135 at 137.720 kb on - strand, within Dsui_0135 at 137.764 kb on - strand, within Dsui_0135 at 137.837 kb on + strand at 137.837 kb on + strand at 137.845 kb on - strand at 137.887 kb on + strand at 137.897 kb on + strand at 137.920 kb on + strand at 137.920 kb on + strand at 137.925 kb on + strand at 137.930 kb on + strand at 137.931 kb on + strand at 137.938 kb on - strand at 137.940 kb on - strand at 137.940 kb on - strand at 137.950 kb on - strand at 137.962 kb on - strand at 137.975 kb on + strand at 137.975 kb on + strand at 137.983 kb on - strand at 137.983 kb on - strand at 137.984 kb on - strand at 137.995 kb on - strand at 138.003 kb on - strand at 138.033 kb on - strand at 138.033 kb on - strand at 138.060 kb on + strand at 138.079 kb on - strand, within Dsui_0136 at 138.080 kb on + strand, within Dsui_0136 at 138.093 kb on + strand at 138.124 kb on + strand, within Dsui_0136 at 138.139 kb on - strand, within Dsui_0136 at 138.160 kb on + strand, within Dsui_0136 at 138.193 kb on - strand, within Dsui_0136 at 138.213 kb on + strand, within Dsui_0136 at 138.215 kb on + strand, within Dsui_0136 at 138.220 kb on + strand, within Dsui_0136 at 138.221 kb on - strand, within Dsui_0136 at 138.228 kb on - strand, within Dsui_0136 at 138.232 kb on + strand, within Dsui_0136 at 138.270 kb on + strand, within Dsui_0136 at 138.320 kb on + strand, within Dsui_0136 at 138.376 kb on + strand, within Dsui_0136 at 138.406 kb on + strand, within Dsui_0136 at 138.407 kb on - strand, within Dsui_0136 at 138.518 kb on - strand, within Dsui_0136 at 138.577 kb on + strand, within Dsui_0136 at 138.585 kb on - strand, within Dsui_0136 at 138.585 kb on - strand, within Dsui_0136 at 138.649 kb on + strand, within Dsui_0136 at 138.651 kb on + strand, within Dsui_0136 at 138.661 kb on + strand, within Dsui_0136 at 138.661 kb on + strand, within Dsui_0136 at 138.664 kb on - strand, within Dsui_0136 at 138.669 kb on - strand, within Dsui_0136 at 138.727 kb on + strand, within Dsui_0136 at 138.735 kb on - strand, within Dsui_0136 at 138.736 kb on - strand, within Dsui_0136 at 138.752 kb on - strand, within Dsui_0136 at 138.829 kb on - strand, within Dsui_0136 at 138.870 kb on - strand, within Dsui_0136 at 138.921 kb on + strand, within Dsui_0136 at 138.929 kb on - strand, within Dsui_0136 at 138.933 kb on - strand at 138.934 kb on - strand, within Dsui_0136 at 138.935 kb on + strand, within Dsui_0136
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 135,572 + +0.4 135,580 - -0.4 135,727 + -0.6 135,735 - -0.2 135,735 - -1.2 135,812 - -0.2 135,819 - +0.1 135,863 + +0.4 135,894 + -1.6 135,902 - -0.5 135,902 - -0.1 135,902 - -3.5 135,902 - -0.2 135,902 - -0.2 135,924 + -1.6 135,926 - -0.4 135,926 - -0.4 135,932 - -0.3 135,932 - -0.1 135,947 - +0.2 136,005 - -1.2 136,007 + +0.4 136,007 + -0.6 136,015 - -2.8 136,015 - +0.4 136,023 - -1.6 136,068 - Dsui_0134 0.13 -0.6 136,073 + Dsui_0134 0.14 +0.4 136,081 - Dsui_0134 0.16 -3.6 136,129 - Dsui_0134 0.24 -1.6 136,152 - +0.4 136,185 + Dsui_0134 0.34 +0.4 136,260 - Dsui_0134 0.47 -1.5 136,260 - Dsui_0134 0.47 -2.6 136,270 - Dsui_0134 0.49 +0.4 136,299 + +0.4 136,378 - Dsui_0134 0.68 -0.6 136,384 + Dsui_0134 0.69 -0.6 136,445 + Dsui_0134 0.79 -0.6 136,456 + Dsui_0134 0.81 -1.6 136,489 - Dsui_0134 0.87 -0.6 136,518 + +0.4 136,601 + +0.4 136,668 - -1.0 136,709 - Dsui_0135 0.11 -0.4 136,771 - Dsui_0135 0.15 -1.3 136,783 - Dsui_0135 0.16 -0.2 136,793 + Dsui_0135 0.17 -2.8 136,811 - Dsui_0135 0.18 -0.3 136,811 - Dsui_0135 0.18 -0.6 136,811 - Dsui_0135 0.18 -1.6 136,938 + Dsui_0135 0.27 -1.6 137,100 - Dsui_0135 0.39 -0.5 137,102 + Dsui_0135 0.39 -0.6 137,155 + Dsui_0135 0.43 -1.2 137,221 + Dsui_0135 0.48 +0.4 137,229 - Dsui_0135 0.48 -2.2 137,322 + Dsui_0135 0.55 +0.4 137,350 + Dsui_0135 0.57 -2.0 137,412 + Dsui_0135 0.62 +0.4 137,420 - Dsui_0135 0.62 -0.0 137,454 + Dsui_0135 0.65 -1.2 137,515 + +0.4 137,526 - Dsui_0135 0.70 -0.7 137,574 - Dsui_0135 0.74 -1.3 137,604 + Dsui_0135 0.76 -0.6 137,625 - Dsui_0135 0.77 -0.8 137,703 - Dsui_0135 0.83 -0.5 137,711 + Dsui_0135 0.84 -0.7 137,719 - Dsui_0135 0.84 -2.2 137,720 - Dsui_0135 0.84 -1.1 137,764 - Dsui_0135 0.87 +0.4 137,837 + -0.6 137,837 + +0.4 137,845 - -0.7 137,887 + +0.4 137,897 + +0.4 137,920 + +0.4 137,920 + +0.4 137,925 + -1.2 137,930 + -2.0 137,931 + -1.2 137,938 - -0.0 137,940 - -0.3 137,940 - -2.2 137,950 - +0.4 137,962 - -0.2 137,975 + +0.4 137,975 + +0.4 137,983 - -1.9 137,983 - +0.8 137,984 - -0.5 137,995 - -0.2 138,003 - +0.5 138,033 - -2.6 138,033 - -0.5 138,060 + +0.4 138,079 - Dsui_0136 0.10 -0.9 138,080 + Dsui_0136 0.10 +0.4 138,093 + +0.4 138,124 + Dsui_0136 0.13 +0.4 138,139 - Dsui_0136 0.14 -0.9 138,160 + Dsui_0136 0.15 +0.4 138,193 - Dsui_0136 0.17 -1.3 138,213 + Dsui_0136 0.18 -1.2 138,215 + Dsui_0136 0.18 -1.2 138,220 + Dsui_0136 0.19 -1.2 138,221 - Dsui_0136 0.19 -1.2 138,228 - Dsui_0136 0.19 -0.3 138,232 + Dsui_0136 0.20 -0.6 138,270 + Dsui_0136 0.22 -1.6 138,320 + Dsui_0136 0.25 -1.2 138,376 + Dsui_0136 0.28 +0.4 138,406 + Dsui_0136 0.30 +0.4 138,407 - Dsui_0136 0.30 -0.9 138,518 - Dsui_0136 0.37 -1.6 138,577 + Dsui_0136 0.41 -1.6 138,585 - Dsui_0136 0.41 -1.1 138,585 - Dsui_0136 0.41 -1.3 138,649 + Dsui_0136 0.45 -1.2 138,651 + Dsui_0136 0.45 -1.2 138,661 + Dsui_0136 0.46 -2.8 138,661 + Dsui_0136 0.46 -1.2 138,664 - Dsui_0136 0.46 -1.2 138,669 - Dsui_0136 0.47 -1.2 138,727 + Dsui_0136 0.50 -1.2 138,735 - Dsui_0136 0.51 -1.2 138,736 - Dsui_0136 0.51 -1.1 138,752 - Dsui_0136 0.52 -0.9 138,829 - Dsui_0136 0.57 -0.6 138,870 - Dsui_0136 0.59 +0.2 138,921 + Dsui_0136 0.62 +0.4 138,929 - Dsui_0136 0.63 -1.1 138,933 - +0.4 138,934 - Dsui_0136 0.63 -0.9 138,935 + Dsui_0136 0.63 -1.2
Or see this region's nucleotide sequence