Experiment: ALP with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0048 and Dsui_0049 are separated by 43 nucleotides Dsui_0049 and Dsui_0050 are separated by 69 nucleotides
Dsui_0048: Dsui_0048 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 44,684 to 45,622
_0048
Dsui_0049: Dsui_0049 - uncharacterized membrane-anchored protein, at 45,666 to 46,976
_0049
Dsui_0050: Dsui_0050 - fructose-bisphosphate aldolase, class II, Calvin cycle subtype, at 47,046 to 48,110
_0050
Position (kb) 45
46
47 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 44.701 kb on - strand at 45.632 kb on - strand at 45.666 kb on + strand at 45.681 kb on - strand at 45.681 kb on - strand at 45.802 kb on + strand, within Dsui_0049 at 45.802 kb on + strand at 45.802 kb on + strand at 45.802 kb on + strand at 45.810 kb on - strand, within Dsui_0049 at 45.810 kb on - strand, within Dsui_0049 at 45.812 kb on + strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.863 kb on + strand, within Dsui_0049 at 45.866 kb on + strand, within Dsui_0049 at 45.907 kb on - strand, within Dsui_0049 at 46.044 kb on + strand, within Dsui_0049 at 46.052 kb on - strand, within Dsui_0049 at 46.306 kb on + strand, within Dsui_0049 at 46.323 kb on + strand, within Dsui_0049 at 46.389 kb on + strand, within Dsui_0049 at 46.416 kb on - strand, within Dsui_0049 at 46.607 kb on + strand, within Dsui_0049 at 46.646 kb on + strand, within Dsui_0049 at 46.664 kb on + strand, within Dsui_0049 at 46.694 kb on + strand, within Dsui_0049 at 46.735 kb on - strand, within Dsui_0049 at 46.735 kb on - strand, within Dsui_0049 at 46.770 kb on - strand, within Dsui_0049 at 46.810 kb on + strand, within Dsui_0049 at 46.903 kb on - strand at 46.917 kb on + strand at 46.925 kb on - strand at 46.965 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Zinc 2 mM remove 44,701 - -0.2 45,632 - -2.5 45,666 + -0.6 45,681 - -0.8 45,681 - -0.5 45,802 + Dsui_0049 0.10 +0.4 45,802 + -0.6 45,802 + -0.6 45,802 + +0.4 45,810 - Dsui_0049 0.11 -0.3 45,810 - Dsui_0049 0.11 -0.6 45,812 + Dsui_0049 0.11 +0.4 45,822 - Dsui_0049 0.12 -1.1 45,822 - Dsui_0049 0.12 -0.4 45,863 + Dsui_0049 0.15 +0.4 45,866 + Dsui_0049 0.15 -0.6 45,907 - Dsui_0049 0.18 -0.7 46,044 + Dsui_0049 0.29 +0.4 46,052 - Dsui_0049 0.29 -1.0 46,306 + Dsui_0049 0.49 -2.5 46,323 + Dsui_0049 0.50 -3.0 46,389 + Dsui_0049 0.55 -1.2 46,416 - Dsui_0049 0.57 -0.8 46,607 + Dsui_0049 0.72 -0.6 46,646 + Dsui_0049 0.75 +0.4 46,664 + Dsui_0049 0.76 -0.6 46,694 + Dsui_0049 0.78 +0.4 46,735 - Dsui_0049 0.82 -0.3 46,735 - Dsui_0049 0.82 -0.7 46,770 - Dsui_0049 0.84 -0.6 46,810 + Dsui_0049 0.87 -0.6 46,903 - -0.6 46,917 + +0.4 46,925 - -1.1 46,965 + +0.4
Or see this region's nucleotide sequence